Brucella anthropi ATCC 49188: Oant_3672
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Entry
Oant_3672 CDS
T00568
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
oan
Brucella anthropi ATCC 49188
Pathway
oan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Oant_3672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oan03019
]
Oant_3672
03016 Transfer RNA biogenesis [BR:
oan03016
]
Oant_3672
Enzymes [BR:
oan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Oant_3672
Messenger RNA biogenesis [BR:
oan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Oant_3672
Transfer RNA biogenesis [BR:
oan03016
]
Prokaryotic type
tRNA degradation factors
Oant_3672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABS16378
UniProt:
A6X574
LinkDB
All DBs
Position
2:1059105..1061468
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AA seq
787 aa
AA seq
DB search
MARRFSKSDTGRSARTERRAAKAKSADGNSDPNAFLPTREEVLKYIEENPDRAGKRELAK
AFNIKGDARVYLKDLLRELSDEGLVEKRARKLSRPGALPAVTVLDITGRDEDGSLLARPS
EWDEAGYGKPPIVLIRRTRLNKASEGGPAVGVGDRVLAKIFRSEDRDGPDYTARVMKRLE
HRTNAVLGIVRKLGNGEWRLDPVNRKQPEVQLDPAQLENAEAGDLVEVDLISSRRQGLPR
GKVRQVVGSIDSEKALSMIAIHEHEIPHVFPAEALSEAEAAQPATMDGREDWRDIPLLTI
DPADAKDHDDAVYAEPDKDPENPGGQIVIVAIADVAAYVRPDSALDREAQKRGNSVYFPD
RVVPMLPERISNNLCSLRELEDRPALAVRMIFAADGRKKSHKFHRIMMKSAVKLAYSQAQ
AAIDGAPDDKTTPILDGILKPLWGAYAVLKRGRDAREPLELDLPEKKILLTPDGKVDKVI
VPERLDAHKLIEEFMIQANVAAAETLEAHRQPLIFRIHDAPALAKQETLREFLRTLDLSL
AKGAELQPAQFNRILEAVEGSDHQELVNQVVLRTQSQAEYNPDNIGHFGLHLSRYAHFTS
PIRRYADLIVHRALIKALNLGSDGLTTEEEAHLEEISALISSTERRAMLAERETVDRLIA
HFLAAHLGDEYEGRVTGVTRAGLFVNLATYGADGLVPISTLGHEYYLYDEANHAIAGERS
GKGFRLGDTVTVRLVEALPVAGALRFEMVSEPHPLPMATRSHHKASRTMRGRRGKPAGIP
RQKRRGR
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgccgtttttccaaatccgataccggtcgatccgcacggaccgaacggcgtgca
gccaaagcaaaatctgccgatgggaacagcgatcccaatgcgtttctgccaacccgcgaa
gaggttctcaaatatattgaagagaatcctgaccgggcaggcaagcgcgaactggcaaaa
gcattcaacatcaagggcgatgcgcgggtttatctgaaagatcttctacgcgaactttct
gatgagggtctggttgaaaaacgcgcccgcaaactgtctcgccctggcgcactacctgcc
gttactgtgcttgatattacaggacgcgacgaggatggcagcttgctcgcacgtccgtcg
gaatgggacgaggccggttacggcaaaccacctattgtcctgatccgccgcacccgattg
aataaagcttcggaaggcggtcccgcagtgggcgtcggggatcgcgttctggcgaaaata
ttccgcagtgaagatcgcgacggaccggattataccgcccgcgtcatgaagcgtctcgag
caccgcacgaacgcggtgctgggtattgttcgcaagctcggcaacggtgaatggcggttg
gacccggtaaacagaaaacagcctgaggtgcagctcgatccggcacagctggaaaatgct
gaagccggtgatcttgttgaagtggacctgatttcctcgcgtcgtcagggattgccgcgc
ggcaaagttcgacaggtggttgggtctatcgatagcgaaaaagccctgtcgatgattgcc
atccatgagcatgaaattccgcatgttttcccggctgaagcgctgagcgaagcagaagcc
gcccagcctgcgacgatggacggtcgggaagactggcgcgacattccgcttctcaccatt
gatccggctgacgccaaagatcatgacgacgccgtttacgccgagccggacaaggatcct
gagaatccgggcggccagattgtcatcgtggctatcgctgacgtcgccgcctatgtccgt
ccagattccgcgcttgatcgtgaagcacagaagcgcggtaactcggtctatttcccggac
agggtcgtgccgatgcttcccgaacggatttcaaacaatctttgctcgctgcgcgaactg
gaagatcgccctgcccttgcggtccgtatgatctttgcggctgacgggcgcaagaaatcg
cacaagttccatcgcatcatgatgaaatcggcggttaagcttgcctattcgcaagcccag
gctgccattgacggcgcgccggatgacaagaccacgcccattctcgacggcatactaaaa
ccgctgtggggcgcctatgctgtgctgaagcgtgggcgcgatgctcgcgaaccgctggaa
ctcgatttaccggaaaagaaaatcctgctcacgcccgatggcaaggtagacaaggttatc
gttcctgaacggctcgatgcacacaagcttatcgaagagttcatgattcaggcgaatgtc
gctgctgcagaaacattggaagcgcaccgtcagccgttgattttccgcattcatgatgct
ccggctcttgccaaacaggaaaccctacgtgaattcctgcgtacgcttgatctgagtctt
gccaaaggcgcggagctgcaacccgcgcagttcaaccggattcttgaagccgttgaaggc
tcggatcatcaagaactggtcaatcaggtcgtgctgcgcacacaaagccaagcggaatat
aaccctgataatatcggacatttcggcctgcatttgagccgctatgcgcatttcacctcg
ccgatccgccgttatgccgatctcatcgttcaccgcgctctgatcaaggccctgaacctt
ggaagtgacggactaacgacagaggaggaagcgcatctcgaagaaatctccgcgctcatc
tcctcgaccgaacgtcgcgccatgctggccgagcgtgaaactgttgaccgtctcattgca
cattttctcgccgcacatcttggagacgaatatgaagggcgcgtgacgggcgtaacgcgg
gccggtcttttcgtgaaccttgcgacatatggcgcggatgggctggtacccatttcaact
ttaggtcatgaatactatttatatgacgaagcgaaccatgcgattgccggtgaacggagc
ggtaaaggcttccggcttggtgatacagtgacggttcggcttgtagaagcgctccccgtt
gcgggcgcgcttcgctttgagatggtttcggaaccgcatcccctgccgatggcgacccgc
tcgcatcataaggcaagccggacgatgcgtgggcgaaggggtaaacccgcgggtattccg
cgtcagaagagaagaggtcgctga
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