Octadecabacter arcticus: OA238_c27400
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Entry
OA238_c27400 CDS
T02539
Symbol
rpoH1
Name
(GenBank) RNA polymerase sigma-32 factor1
KO
K03089
RNA polymerase sigma-32 factor
Organism
oar
Octadecabacter arcticus
Brite
KEGG Orthology (KO) [BR:
oar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oar03021
]
OA238_c27400 (rpoH1)
Transcription machinery [BR:
oar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OA238_c27400 (rpoH1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_11
DUF3431
DUF1378
Motif
Other DBs
NCBI-ProteinID:
AGI72775
UniProt:
M9RSH5
LinkDB
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Position
complement(2921832..2922728)
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AA seq
298 aa
AA seq
DB search
MSSYANLPAPTPEQGLNRYMQEIRKFPMLEPDEEYMLAKRWVDHEDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPTAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYVLRS
WSMVKLGTTSAQKKLFFNLRKAKNRIGALEEGDLRPENVQRIATDLGVTEAEVVSMNRRM
SGGDASLNATVGSDGEGTMQWQDWLEDESADQAGDYEARDELTQRRELMAEAMEVLNDRE
KDILMQRRLAEKTVTLEDLSGQYSVSRERIRQIEVRAFEKLQKKMQTLAKDRGMLATA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttacgcaaatcttccggcgccaacgccagaacaaggcctgaaccgctacatg
caggaaatccgcaagtttccaatgctggaaccggatgaggaatacatgctcgccaaacgg
tgggtggaccatgaggacaccgaagctgcacacaaaatggtgacgtcgcacctgcggctg
gccgccaaaatcgccatgggctatcgtggctacgggttgccaacggccgaagtgatttcg
gaggccaatgtgggcctgatgcaagctgtgaaacgctttgatcctgaaaagggtttccga
ctcgcgacgtacgcgatgtggtggattcgtgcgtctattcaggaatatgtgctgcgatca
tggtccatggtcaaactcggcacgacatcggcgcaaaagaagctgtttttcaatctgcgc
aaagccaagaaccgcatcggtgccttggaagaaggcgatttgcgtccagagaacgtgcag
cggattgccactgatcttggggtgacagaggccgaagttgtctccatgaaccgccgcatg
tctggcggggatgcgtccttgaacgccactgtcggatctgacggcgaaggcacgatgcaa
tggcaagactggttggaagatgaatccgccgaccaagcaggcgattacgaagcccgcgat
gagttaacacaacgccgcgagcttatggcagaagctatggaggttctgaacgatcgcgaa
aaagacattctgatgcagcgtcgtttggctgaaaagactgtgacgcttgaagatttgagt
gggcagtattcggtcagccgcgaacgtatccgccagatcgaagtgcgcgcgttcgaaaaa
ctgcaaaaaaagatgcagactttggccaaagatcgcgggatgctggcgacagcctaa
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