Ovis aries (sheep): 101116751
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Entry
101116751 CDS
T03117
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X2
KO
K14327
regulator of nonsense transcripts 2
Organism
oas
Ovis aries (sheep)
Pathway
oas03013
Nucleocytoplasmic transport
oas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101116751 (UPF2)
03015 mRNA surveillance pathway
101116751 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101116751 (UPF2)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101116751 (UPF2)
mRNA cycle factors
P-body specific factors
101116751 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
101116751
NCBI-ProteinID:
XP_014955028
EnsemblRapid:
ENSOARG00020005801
LinkDB
All DBs
Position
13:complement(15955169..16049449)
Genome browser
AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKESLLNSKEKDCSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQVKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESSKDDSKETKEPKDNKEVSSPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NSDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttactaaacagc
aaggaaaaagactgcagtgaaaggcggcctgtgagcagcagggagaaaccaaaagaggag
atcaagcttactgccaagaaggaggttattaaggtccctgaagataagaagaagaaactg
gaagaagataaaagaaaaaaagaagacaaagaacgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaggaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaagaa
gagagaaagaagcaagaagaacaggtgaaacgtcagcaggaagaagaggctgcccagttg
aaagagaaagaggaatcccttcagcttcatcaggaagcttgggaacgacatcagctaagg
aaagaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaataccgcttttgtcaagaagctaaaaactatt
acagaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaggctgtcgcttctattgtggaagcaaagctaaaaatatctgacgtgaattgt
gctgtgcacttatgctcgctctttcaccagcgctacgccgactttgccccatcacttctt
caggtttggaaaaaacattttgaagccaggaaagaagagaaaacacctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttccttaatctatgaacagctaaaaaatattattaatgctgatcgggaatcc
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacagcaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacatctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagttaagtgaagatagacataaacagtatgaagaa
tttgctatgtcttatcaaaagctactggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagataaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttagaaggtggtatatgggaagat
gaagatgctcggaatttttacgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagagtccagcaaggatgattccaaa
gagacaaaggaacctaaggataataaggaagtatcaagtcctgatgatttggaacttgag
ttggagaacctggaaattaatgatgatacattggagctagagggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctccagcagttacccaactgtgtcaaccgt
gatctgatagacaaggcagcaatggacttttgcatgaacatgaacacgaaagcaaatagg
aagaagttggtacgggcgctctttatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaactcactaagtttaagatgttcacaaaa
aatgatacactgcattgtttaaagatgcttctatcggacttttcccatcaccatattgaa
atggcatgtaccctactggaaacatgtggaaggttccttttcagatctccagaatctcac
ctgaggaccagtgtgcttttggaacaaatgatgagaaagaaacaagcaatgcatctcgat
gcaagatatgtcacaatggtggaaaatgcatattactactgcaacccacctccagctgaa
aaaacagtgaaaaagaaacgtcctcctcttcaggaatatgtccggaagcttttgtacaaa
gatctctccaaggttaccaccgagaaggttttgagacagatgaggaagttgccttggcag
gatcaggaagtgaaagactatgtgatttgttgtatgataaacatctggaacgtgaagtac
aacagcattcactgtgtagccaacctcttagcaggactagtgctctaccaggaagatgtt
ggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaagttcttgggggaactttataattac
agaatggtggaatcggccgttatttttagaactctttattcttttacttcatttggtgtt
aactctgatggctctccaagttcactggaccctcctgagcaccttttcaggattagactg
gtgtgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaa
ctcgattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgacatagattacatgatcagtgacacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctcgtaaatgacaaagactctaaagat
tctatgacagaaggagaaaatcttgaagaagatgaagaagaagaagaaggaggagctgaa
acagaggaacaatctggaaatgaaagtgaagtgaatgagccagaggaagaggagggttct
gataatgatgatgatgaaggagaggaggaagaggaagagaatacagattatctcacggat
tcaaataaagagaatgaaactgatgaagaaaatactgaggtaatgattaaaggaggtgga
ctgaaacatgtaccttgtgtagaagatgaagacttcattcaagctctggataaaatgatg
ctagaaaaccttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgcc
attcccttgcacctcaaaagccagctgaggaaaggacccccacttggtggtggggaggga
gagacagagtctgcagacacaatgccgtttgtcatgttaacccgaaaaggcaataagcaa
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggaaccag
caacaagcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaatgaa
cggcaagaacaagaagattatcaagagatgctacagtctcttgcccaacgcccagctcca
gcaaacaccaatcgggagcggcggcctcgttaccaacacccaaagggagcacctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
