Ovis aries (sheep): 101121945
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Entry
101121945 CDS
T03117
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
oas
Ovis aries (sheep)
Pathway
oas03013
Nucleocytoplasmic transport
oas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101121945 (UPF3A)
03015 mRNA surveillance pathway
101121945 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
101121945 (UPF3A)
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101121945 (UPF3A)
mRNA cycle factors
P-body specific factors
101121945 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
101121945
NCBI-ProteinID:
XP_014953767
EnsemblRapid:
ENSOARG00020008874
LinkDB
All DBs
Position
10:86392471..86419188
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AA seq
513 aa
AA seq
DB search
MRSEDGAGGPGVAVATRGPSGREKPSSAESQFRRESPRREAEAPLAAASGCGSGAGKPRE
EKRTVLSKVVIRRLPPSLTKEQLEQQLHPLPAHDYFEFFTADVSLYPHLYSRAYINFRNP
DDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKIAKKKLKKKDAKTGSIDDDPEYKKFL
ETYCVEEEKTSVSPETLLGDIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRRRREEERCRRRAAEKQKKTAEKEARVKLLKKPEKGEEPSTEKPKGR
VEEAEPGDGRWEPCPRGVVLKPQPSEGSLEELRERSQNDSDKEQRDKERRSREKELEAQR
CHLDDRRHRARYELEECSGRNGEELASGKGSAADRGRRGSQERGCPVEAAERPGREKSED
RPAPRKERTGSKDRPGLQLYQPRARIRARDCDGRHPEEGCDGRRGEVEDSTVALAEKSEE
AVWGDMHVGDLGGGSPPQHSVDSRGRSFRKCIN
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggaggatggagccgggggccccggtgtggccgttgctacgcggggtccgagc
gggagggagaaaccatcatccgcagaaagtcagttccgccgggagtctccgcggcgggag
gccgaagcgccgctggccgccgcctccggctgtgggagcggcgcaggcaaacctcgcgag
gaaaagaggacggtcctgagcaaagtggtcatccggcggcttccgcccagcctcaccaag
gagcagctggaacagcagctgcacccactgcctgcacacgactacttcgagttcttcact
gctgatgtcagtctttaccctcatctctactcaagagcatacattaactttagaaatcca
gatgacatccttctttttagagatcgttttgatggatatatcttcattgatagtaaaggg
ctggaatatcctgcagtggtagaatttgctccattccagaagatagccaagaagaagcta
aagaagaaagatgccaagacgggaagcattgacgacgacccggagtacaagaaatttttg
gaaacttactgtgtggaggaggagaaaactagtgtcagtcctgaaactcttctgggagac
atagaggcaaagacacgagaacttattgctagaagaaccacacctctcttggaatatatt
aaaaacagaaaattagagaagcagcgaattcgagaagaaaagcgagaggagcggagaagg
agggagctggaaaagaagcgcctacgggaagaagagaagcggaggcggcgcgaggaggag
aggtgcaggaggagagcagcagagaagcagaagaagacagcggagaaggaagcaagggtg
aagcttctcaaaaaaccagaaaagggagaggagccgagcaccgagaaaccaaaaggaaga
gtggaggaggctgagcctggagacgggaggtgggagccctgtcctcgtggggtggtcctg
aagccccagccctcagagggttcgctggaggagctgcgggagaggtcacagaatgacagt
gataaagagcaaagggataaggagagaagatcccgagaaaaagagcttgaagcacaacga
tgccacttggatgacaggagacacagagcccgctacgagctggaggaatgttcgggaaga
aacggagaagagctggcgagcgggaaggggtcggccgcagacagagggaggagagggagc
caggagaggggctgccctgtggaagcggcagagaggccaggcagggagaagagtgaagac
cggccggcacccaggaaggagcgcacggggagcaaggaccggccaggcttgcagctgtac
cagcccagagctcgcatccgagcccgtgactgtgatggaagacaccctgaggagggctgt
gacgggaggaggggtgaggtggaagactcaacggtggctttagctgagaagagcgaagag
gcggtgtggggtgacatgcatgttggtgacctgggtgggggctccccacctcaacactcc
gtggattcgagagggcgttccttccggaagtgtataaattaa
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