Ovis aries (sheep): 114109733
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Entry
114109733 CDS
T03117
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
oas
Ovis aries (sheep)
Pathway
oas03013
Nucleocytoplasmic transport
oas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114109733
09122 Translation
03013 Nucleocytoplasmic transport
114109733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oas03019
]
114109733
03041 Spliceosome [BR:
oas03041
]
114109733
Messenger RNA biogenesis [BR:
oas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114109733
Spliceosome [BR:
oas03041
]
Complex C
Other components
EJC/TREX
114109733
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114109733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
114109733
NCBI-ProteinID:
XP_027815025
LinkDB
All DBs
Position
1:complement(235126766..235131572)
Genome browser
AA seq
1592 aa
AA seq
DB search
MAAATVVIPVEWIKNWEKSGRGEFLRLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKGDYFTRLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPIGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
QEIVEAKQIVRKLTMVVLSSDKIDEREKEKEKEXKMEKPPDNQKLGLLEALLKIGDWQHA
QSIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVSALQNKRAPKQA
ESFEDLRRDVFNMFCYLGPHLSHDPILFAKMVRIGKSFMKEFQSDGSKREDKEKTEVILS
CLLSITDQVLLPSLSLMDCNACMSEELWXMFKIFPYQHRYRLYGQWKNETYNSHALLVKV
KAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVIDSL
KYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGLL
QYVANQLKAGKSFDLLILKEVIQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRN
TKKSSQRLKDALLDHDLALPLCLLMAQQRNGIIFQEGEEKHLKLVGKLYDQCHDTLVQFG
GFLASNLSTEDYIKQVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGSK
QQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFCATFWSLTMYDLAVPHTSYER
EVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEKD
NWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRVF
SDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFDG
GNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLG
QALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPLRNAVASVQ
NGPGGGPSSSLIRSVSKLDESSIEDTDKLKERSQCRVKAVNKASSAAPKGNSSNGNSGSN
SSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDSKEKPKEERPNKDEKAREMKERT
PKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSTQEKEREKELSRERDIAKEMKSKENVKG
GEKTPVSGSLKSPVPRSDIAEPEREQKHRKIDTHPSPSHSSTVKVTAILPKVPLGSENYA
SSPVISIHCLQDSLIELKESSAKLYINHTPLPLSKNKEREMDKKDLDKSRERSREREKKD
EKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGVSKHKSESPCESPYPNERDKEKNKSK
SSGKEKGSNSFKSEKMDKISSGGKKGVDRPLS
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtgattcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttacgtttatgccggatcctcagtgaaaataaaagccacgatagttca
acttatagagatttccagcaagctctttatgaattatcataccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttagtgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtgttctgcatattagatattgagacaaattgtttagaagaa
aaaagcaaaggagactattttacacgattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcttggatccagaaacattggaatcgttagggcttatcaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaatttaatttgttaagagaagaaaatgaaggttatgccaagctgattgctgaactgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttctggatgtcattttagaagtgtttgaatgc
aggccagaacacgatgacttctttatatctttattagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttatcaggaaccaattgga
gagactccttcatctttatacagagttgcagcagtacttctacaatttaaccttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
caagaaattgtagaagctaagcagatcgttagaaaacttacaatggttgtattgtcttct
gataaaattgacgagagagagaaagaaaaggaaaaagagngaaaaatggagaaaccacct
gacaaccaaaaacttggtttgttggaagccttgttaaagattggggattggcagcatgcg
cagagcattatggatcagatgccgccatactacgcagcttcacataaactaatagccctt
gctatttgcaagcttattcatataactattgagcctctctaccgaagagttggtgttcct
aaaggcgctaaaggttcacctgttagtgctttgcaaaataagagagcaccaaaacaagca
gagagctttgaagatttgaggagagacgtcttcaatatgttctgttaccttggtccccac
ctttctcacgatcccattttattcgcaaaaatggtgcggataggcaagtcgtttatgaag
gagtttcagtctgatggaagcaaacgagaagataaagagaaaacggaagttatccttagc
tgtttgcttagcattactgaccaggtattacttccatctctttctttgatggactgcaat
gcttgtatgtctgaggaactatggngaatgtttaaaatatttccgtatcagcatagatac
cgtctgtatggccagtggaagaatgaaacttacaacagtcatgcacttttagtaaaagtt
aaagctcaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaatgtg
aagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgtttgat
tatatcttgtcacaaatacagaagtatgataacttgataacacctgtaatcgattcattg
aaatacctcacttcgttgaattatgatgtcttggcctattgtatcattgaagctttagct
aatccagaaaaggagaaaatgaaacatgacgacacaacaatctcaagttggcttcagagt
ctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtcttctt
cagtatgtggctaatcagctaaaggcagggaaaagttttgacctgcttatactgaaagaa
gtgatacaaaaaatggcaggaatagaaattacagaagaaatgacaatggagcaactagaa
gccatgactggtggagagcaactaaaagctgagggtggttattttggccagataagaaac
actaaaaaatcctcccagagattaaaggatgcactattagaccatgatcttgctcttcct
ctctgcttgcttatggctcagcagaggaatgggataatctttcaggaaggtgaagagaaa
catttaaaacttgtgggaaaactctatgatcagtgccatgataccctggtacagtttggt
ggttttttagcatctaatctaagcacagaagattatataaagcaagtgccttcaattgat
gtgctctgtaatgaatttcacacacctcatgatgcagcatttttcctgtctaggccaatg
tatgcacaccatatttcgtcaaagtatgatgaacttaaaaaatcagagaagggaagtaaa
cagcagcataaagttcataagtacatcacatcatgtgaaatggtgatggctcctgttcat
gaagcagtggtttccttacacgtttccaaagtctgggatgacatcagtcctcaattctgt
gccacattctggtcattgacaatgtatgaccttgcagttccacataccagctatgaacgg
gaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgcctcca
aataaaaagaaaaaagagaaggagcgatgtactgcccttcaggacaagcttcttgaagaa
gaaaagaaacagatggaacatgtacagcgagttctgcagagactgaaactggaaaaggac
aactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagttgtgt
atatttcctcgatgtattttttccgcaattgatgctgtttactgtgctcgttttgttgaa
ttggtacatcaacagaaaactccaaatttttccacacttctttgctatgatagagttttc
tctgatataatttacacagtcgcaagctgtactgaaaatgaagctagtcgatatgggaga
ttcctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatatgaa
aaggaatgtggaaattatccaggattccttactatattacgagcaactggatttgatggt
ggaaataaagctgatcaattagactatgaaaattttcgacatgttgtacacaaatggcat
tacaaactaaccaaggcatcagtacattgccttgaaacaggtgaatatactcacatcagg
aatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctgggt
caggctttggaaagaagagtgcataaaatctgccaagaggaaaaagagaagaggccagat
ttatatgcactggctatgggctactctgggcagttgaaaagtagaaagtcatacatgata
cctgaaaatgagtttcatcacaaagacccccctctgaggaatgcagttgccagtgtacaa
aatgggcctggtggtgggccttcttcatcgttgatcagaagtgtatctaagttggacgaa
agcagtatcgaggacactgataaattgaaggagagatctcagtgtcgtgtgaaagctgtt
aataaagcttctagtgccgcaccaaaagggaattcaagtaatggaaatagcggctctaac
agcagcaaagctgttaaagaaaatgacaaagagaaaggaaaagagaaagaaaaagagaaa
aaagaaaagactccagctactactccagaggcccgagtacttggtaaagatagtaaagaa
aaaccaaaggaagaacggccaaataaagatgaaaaagcaagagagatgaaggaaagaaca
cctaaatctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgagaaa
ttcaagaccactgtcccgaatgtagaatcaaagtcaactcaagaaaaagaaagagagaag
gagctgtccagagaacgagatatagcaaaggaaatgaaatcaaaggaaaatgttaaagga
ggagagaaaacaccagtttctgggtccttgaagtcacctgttccccgatcagatattgca
gagcctgaaagggaacagaaacatcgcaaaattgatacccatccttctccatcacattcc
tcaacagtaaaggttacagccatacttcccaaagttcctctgggttctgagaactatgcc
agctcacctgtcatctccattcattgtctacaggacagtctcatcgaactcaaggagtct
tcagcaaagctctacattaatcatactcctctaccactgtccaagaataaggagagagaa
atggacaagaaagatttggacaagtcaagggaaagatccagagaaagagaaaaaaaagat
gaaaaggacaggaaagagcggaaaagggatcactcaaacaatgaccgagaagtgccacca
gacttaaccaagaggcggaaagaggaaaatggaacaatgggggtttcaaaacacaaaagt
gaaagtccatgtgagtctccttatccaaatgagagagacaaggaaaaaaataagtcaaaa
tcttcaggcaaagaaaaaggtagcaactcatttaaatctgaaaagatggataaaatctcc
tctggtggcaaaaagggcgtggacagacccctaagctga
DBGET
integrated database retrieval system
