Oreochromis aureus (blue tilapia): 116315386
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Entry
116315386 CDS
T07295
Symbol
phf1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116315386 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oau03000
]
116315386 (phf1)
03036 Chromosome and associated proteins [BR:
oau03036
]
116315386 (phf1)
Transcription factors [BR:
oau03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116315386 (phf1)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116315386 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
ASH2L-like_WH
PHD_2
Chromo
DUF4537
Motif
Other DBs
NCBI-GeneID:
116315386
NCBI-ProteinID:
XP_031589527
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All DBs
Position
LG11:34032819..34051784
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AA seq
561 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCRHGYHLECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYQFQCSVCTKGPETIQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITHRRSPLSLPCQRRVGGPESRKSKRRIMETQACPPPVA
ANPIELLPCCHGYMGGASLYNSRKSEEELNLSSPPKRMYALYHTTYNGNSTLSRSLHHYN
SMEDNCRLPPTYFPYPLNSNSNHHHHHLHQHHHSHQHNHQHQHQLGQKQLEPLILRDLPP
YQAGMGAGGGGGGGGGGGGGGGGGGGGGGGGGGAPGMGVGGGDGTVARNWGGGEAVRILA
RRVTPDGKVQYLVEWENVSLY
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggagatgatgtgttggctcgatggagtgatggactactgtac
ctcggcaatgtgaaaagagtagatggagtcaagcagtgttgtctggtgagatttgaggac
aactctgagttctgggtactgagaaaggacattcactcgtttgctgctggagtggaagaa
gtttgctgtatttgtgacgctccgcctcttaaagaacccctcataaattgtcttaaatgt
cgccacggttatcatctggagtgtcacacgccaaccatcgaaccggaagctgacagcgat
tcgtggatatgtcggcaatgtgtctttgcagtcgcaaccaagagagggggggccctcaaa
cgggggcgctttgcccggctcatgcagtttatgaaacttcggctcccctatcagctgtca
tccctggactgggacccacagcacctgaccaatcagcagcagtgttactgctactgtgct
ggacctggagagtggaacctgaagatgttacagtgtggcagctgtggtcagtggttccac
gaggcctgcacgcagtgtctaaccaagcctttgctgtatggggacaggttttatcagttc
cagtgctctgtttgtacaaagggaccagagacgatccaaagactccccatgacttgggtg
gatttggctcatttagtactctaccatctctcgctgtgctgcaagaggaaatactttgat
tttgaccatgaaatcctgtccttcaccaatgagaattgggactcgttgctgctaggcgcg
ctctctgacacgccaaggcaagaccgctgtcacaatctcctcaacgctctgaactcccac
aaggacaggtttgtctccggaaaggagatcaagaagaaaaagtgtctttttgggcttcag
gttcgagcccctccaccgctgacgtccgattcgtcaccgctcatcaccgacccacctatc
aacatcacgcaccggagaagcccattgtcgctaccctgccagaggagagtgggggggcca
gagtcacgtaaatcaaagcgtcgcatcatggagacacaggcatgtccacccccagtagct
gccaaccctattgagctactgccatgttgccatggatacatgggtggggccagcctgtat
aactccaggaagtcagaggaggagcttaacctgagctctcctcccaaacggatgtatgcc
ctataccacaccacctacaatgggaactcaacactctccaggagtctccatcactacaac
agcatggaggacaactgcaggttaccaccaacatacttcccataccccctcaactccaac
agcaaccatcaccaccaccacctccaccagcaccatcacagccaccagcacaatcaccaa
catcaacaccagctggggcagaagcagctggagcccctcatcctacgtgacttacctcct
tatcaggctggcatgggtgcaggaggtggtggaggtggaggcggaggaggaggaggtggc
ggcggtggtggcggaggaggaggaggaggtggtggtggggcaccgggaatgggagtggga
ggtggggacggaacagtggccaggaactggggaggaggggaggcagtgaggatcctggcg
agacgagtcacacctgatgggaaggtgcagtacctggtggagtgggagaacgtgagtttg
tactga
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