Oreochromis aureus (blue tilapia): 116315808
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Entry
116315808 CDS
T07295
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116315808 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116315808 (edc4)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116315808 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
116315808 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
PIN_8
Motif
Other DBs
NCBI-GeneID:
116315808
NCBI-ProteinID:
XP_031590079
Ensembl:
ENSOABG00000011076
LinkDB
All DBs
Position
LG7:complement(58954931..58985657)
Genome browser
AA seq
1392 aa
AA seq
DB search
MASNTNIDIEGATQHLRDILKLDRPGNSTDGNSSESGRKPSFNGELNGLLGTGLLGSTDR
STMSESTRPISTDLSSAQESQIICLSGDDGSTCIPITSNNVEIVASQDSSINSKARGSNK
VKIQPVAKYDWEHKYYYGRLIAVSNAFLAYAIRGANNHAMVRVLSLEFGERSLLKGFTGA
VTDLAFAHLDSSLLGCVDEAGNLMVWQLTYTANKILDQIVVHIRRPENTPLNSHRRLIWC
PFIQDDNEENQDDASQTLALLHEDRAEVWDLEALRANNSSWPVDATEVKDGLIAVKGHTQ
RVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRCLHELRPHGGRPLSCLLFCDNH
KRQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPLNSSTLPSLKASLDLSA
EYLILTDVQRKVLYVMELRQDLEKGKANFTAVSEFLLTHPVLSFGVRDVTQCRLRHTEVL
PAEEESESMTTEGTQGPTESKSGIQIKLYCVHTKSLQDVQIWFQPNAGSNSAAFLPHSDS
QDGLAGFSDHLTDQSSDKDSGSGSQTDLRKIPSLPAPSDFLSSSGTGSGVMPKLMTPDAF
MTPSTSVPASPGSSASSLTIVTAISSNSDSTNRAMEDASQSPNRVDNSSTGLTLSASTSS
PRAASTVLLPGLENLQALATPSGPLVLDSSQVLDPPLLPPLASPTRARSPDVISSASTAM
SQDMPEIASQTLQLQRGLVSSLDPLPLSALQTDSMASAASALHLLTSPRSANNSGLLPLE
LGGAEGPVGGAAESESRLSHTPSLLENALSQENPVIGGGSSDGSVSHTSWPAAPDITRET
RNSLRDNGLVDCSREESQDRHLSSPYHRRSYHLTQNDSQDAGAEQSDPDDEVASLASSSG
NCGSRSSHRLPVNDWKTSPRGSPKPKRKIKKDDSESSQSRQMDSGQFNAEVQDELMMLLR
SQQRELTELRGQIETMQSSIMAQVEHVLTNHQEQEHRRLERVLAESQNHQQQLQEQLSQQ
LSHALSSALTNRMDKVLRDEMKKTVPQTISKTLEPVTGQLNNTIAAKLTAVEITLKDNVG
KVVKSKNTTDAIGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGTQ
EYIQQLETHMKNRKQRDQDTRDPMIGQLQQMIDNFQSSTDQLGNNITANVRAEVQHQIQM
MVGNLQESILSHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQT
NILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQVFGQHPCPLSQPVLLSLIQQLS
SNLTTRSELKISYLEDAVMNLDHSDPLTRDHMSSVLAQVRPKLFAFLQQDPHSPLSKRAR
RLMMMLQGLVNH
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaatactaatatagacatcgagggtgcaacccagcatctccgggacatcctc
aagctcgaccgtcccgggaacagcaccgatggaaattcaagtgaaagtggtagaaagcca
tcttttaatggagagctgaatgggttattgggaacaggccttctagggagcactgaccgg
tcaaccatgtcagaatctacaagacccatctccacagacctcagcagtgctcaggagagt
cagataatctgcctttctggtgatgatggctctacctgtattccaattacttctaacaat
gtggagatagtggcaagccaagactctagcattaacagcaaggctcgaggcagcaacaag
gtgaagattcagcctgttgctaagtacgactgggagcacaagtattattacggcagactg
atagctgtgtccaatgccttcctggcctacgccatcagaggagccaacaaccatgctatg
gttcgtgtcctcagtttggagtttggtgagcgttccttactgaagggattcaccggggcc
gtcacagatctggctttcgcccaccttgattcatctctgttaggttgtgtagatgaagcg
ggcaacctgatggtctggcagctcacctacactgccaacaagatactagatcagatagta
gttcatatccgacggccagaaaacactccactgaattcccatcgtcgcctcatctggtgt
ccattcatccaggatgacaacgaggagaaccaggatgatgccagtcaaactttggctctt
ctacatgaagacagggctgaggtatgggatctggaggccttgagagccaacaacagcagc
tggcctgttgatgccacagaagtaaaggatggcctcatcgcagtcaaggggcatactcag
agagtcagtgaaggcgcactgtctccagatggaaccgtgttagccacagccagccatgat
ggatacatcaagttctggcagatatacatagaaggcgggcaagacaagcccagatgtctt
catgaattgcggcctcatggtggacgtcctctctcctgtcttcttttctgtgacaaccac
aagaggcaggaccccgaggttcctttctggcgatttctgataactggagccgaccaaaac
caggagttgaagatgtggtgcactgtttcctggacctgtttacaaaccatcaggttctcc
cccgatccattaaactcatcgactctgccaagtctcaaggccagcctggacctctctgct
gagtatctgatcctcactgatgtgcaaaggaaggttttatatgtgatggagctgcgacag
gacttggagaaaggaaaggcaaatttcacagcagtgtcagagttcttgctgacccaccct
gtgctcagctttggggtacgtgatgttacccagtgtcgattgcggcacactgaggtcctt
cctgctgaggaggagagtgaaagcatgacgacagagggcactcaaggacccacagagtcc
aaatctgggatccagattaaactctactgtgtccacaccaagagtttgcaggatgttcaa
atttggtttcagcccaatgcaggttccaactctgcagcgttccttcctcattcagattct
caggatggtctggctgggttttcagaccatctcactgatcaaagctctgacaaggattca
ggaagtggctcccagactgatctaaggaagatcccatcacttcctgctccctcagacttc
ctgtcaagctcgggcaccggcagtggagtgatgcccaagctgatgactcctgatgccttc
atgacaccgagtacttcagtaccagcatctccggggagcagtgccagcagtctgaccatt
gtgacagctataagcagcaactctgactcaacgaacagagctatggaggatgcaagtcag
agtcctaacagggttgacaatagcagcactgggctgacactctctgcctccaccagcagc
ccaagagctgcttccactgtgctactgcccggacttgagaatctgcaggctttggcaacc
cctagtggtcctctggtactcgacagctctcaggttctagatcctccactcctgccacct
ttggcatctccaactagagcccgctcccctgacgtcatctcctcagcatccacagccatg
tcccaggacatgccagaaatcgcctctcagaccctgcagcttcagcgtggactagtgtcc
agcttggatcccttacctctttctgccctccagacagacagcatggcctctgctgcctct
gcgctgcacttgttaacctcaccgcgctcagccaacaacagtggcttgttgccccttgaa
cttggaggtgcagaagggcctgtgggcggggcagcagagtctgagtccagactgagtcac
acaccatctctgcttgagaatgcgctctcacaggaaaatcctgtgataggaggagggtct
tcagatggcagcgttagccacacatcttggccagctgccccagatatcaccagagaaacc
aggaacagtctcagggacaacggacttgttgactgttcaagagaggaatcacaggacaga
cacttgagctcaccttaccatcgacgctcatatcacctgacacagaatgacagtcaggac
gctggagccgagcagagtgaccctgatgatgaggtggccagtctggcgtcatcctctgga
aactgtggttctcgatcttcccatagactaccagtgaatgattggaaaacctcaccacga
ggatcaccaaagccaaagagaaagatcaagaaagacgacagtgagtcatcacagtccagg
caaatggattctggtcagtttaatgcagaagtacaggatgagttgatgatgctgttgcgt
agccagcagagggagttaactgaactgcggggacagattgaaaccatgcagagctccatt
atggctcaggtggaacatgtcctgacaaatcaccaggagcaagaacaccgcagacttgag
cgagtcctggcagagagtcagaatcatcagcagcagcttcaggaacaactcagccagcag
ctcagccatgccctcagctcagctctgaccaaccggatggacaaagtgcttcgggatgaa
atgaagaaaacagtcccacaaacaatctctaagactttggagccagtgacaggccagctg
aacaacacaatcgctgctaaactgaccgctgtggagatcaccctgaaggacaatgttggc
aaagtggtgaaatcgaagaacacaacggatgcgattggtcgagcagcagcagaggcgatg
cagggccccatccaggcagcatataaagatgccttccagagcattgtgcttcctgttttt
gaaagaggctgccagtccatgtttcagcaaatcaacgacagcttcaaacaaggcacacaa
gaatacatccagcagcttgagactcatatgaagaacagaaagcagagagaccaggatacc
cgagaccccatgattggccagctccagcagatgatcgacaacttccagagctccactgat
cagctgggcaacaacatcacagctaacgtccgggctgaagtccagcatcagatccagatg
atggtgggaaacttgcaggagtctattcttagccatgtgcagcggattgtcaaaggtgag
gtgagcctagcgatgaaagagcagcaggcagtggtcacctccagcatcatgcaggcaatg
aggtcggcggccggcacaccagttcccacagcacatttagactaccagacacagcagacg
aacatcctgcagctcctccagcagggccaactcaatcaggctttccagcaggctctgtca
gcaactgatctgaatttggtcttgtatgtgtgtgagaccatcgactctcagcaggtgttc
ggacagcacccctgccctttaagccagcccgtgctgctttctctcatccagcagctttct
tctaacctcacaactcgctctgagctcaaaatcagctacctggaggatgcagtaatgaat
ctggaccacagcgaccccctgaccagagaccacatgtcgtccgtgctggcccaggtcaga
ccaaagctctttgccttcctgcagcaggacccccacagcccgctcagcaagagggcgcgg
cgcctgatgatgatgctgcagggactcgtcaaccactag
DBGET
integrated database retrieval system
