Oreochromis aureus (blue tilapia): 116335447
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Entry
116335447 CDS
T07295
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04010
MAPK signaling pathway
oau04020
Calcium signaling pathway
oau04260
Cardiac muscle contraction
oau04261
Adrenergic signaling in cardiomyocytes
oau04270
Vascular smooth muscle contraction
oau04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116335447 (cacna1fb)
04020 Calcium signaling pathway
116335447 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
116335447 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
116335447 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
116335447 (cacna1fb)
04270 Vascular smooth muscle contraction
116335447 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oau04040
]
116335447 (cacna1fb)
Ion channels [BR:
oau04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116335447 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116335447
NCBI-ProteinID:
XP_039460945
LinkDB
All DBs
Position
LG20:4612338..4655689
Genome browser
AA seq
2075 aa
AA seq
DB search
MYEENHRSSGRNGYAKAVDGEEGGGEGEEEEEGGEVDGREDREEGGGEESNAEWDQELDG
EDEGGVRMTRTDTLHSTTSSTGTQRKRGQHAKKQVQGTNQVQRAPRALYCLKLNNPIRRA
ALHIVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTVETFL
KILAYGLVMHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSSGEQATTHHMPGKPGGL
DVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFI
GRMHRTCYYIGTDNYVEDDPVPCAFAGHGRQCIINGSECRGRWDGPNGGITNFDNFFFAM
LTVFQCITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKERE
KAKARGDFQKLREKQQMEEDLCGYMDWITQAEDMDELDEDGNPRPSLGDLADKKRGKFGW
FSHSNETHASLPASETASENTENIDEEHTNCCQACCAQMMKIGCCRTLRRWNRVCRRNCR
TAVKSVTFYWLVLLLVFLNTSLSASEHYNQPDWLTQVQDIANKVLLSLFTVEMLLKMYSL
GLAHYFVAFFNRFDCFVVCGGIVETILVELEIMPPLGISVLRCVRLLRIFKVTRHWTALS
NLVASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLT
CFQILTGEDWNMVMYDGIMAYGGPVFPGMIVCIYFVILFICGNYILLNVFLAIAVDNLAG
GDSDDKKKDKKQEGAEEEATEGEVKVDVDEDTEYEEEEELPEGDEDGGVQLKMADLAPPK
EKVLPIPEGSAFFCLSKTNPIRVACHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSF
RNNILGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHS
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGV
QLFKGKFYRCTDEAKHTPEQCKGTFVVYKDGDVSHPMVRERIWMNSDFNFDNVLMGMMAL
FTVSTFEGWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIIT
FREQGEQEYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYVMFVL
ILLNTVTLAIQHYEQSKTFSYIMDILNMVFTGLFTLEMLLKLAALRIRHYFVDAWNSFDA
LIVVGSVVDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQA
LPYVALLIAMIFFIYAVIGMQTFGKIAMQDYTQINRNNNFQTFPQAVLLLFRCATGEAWQ
EIMLASLPGKRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDY
LTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACK
RLVAMNMPLNADGMVTFNATLFALVRTALKIKTEGNPEQENEELRVIIKKIWKRMKPKLL
DEVIPPHEEEEVTVGKFYATFLIQDYFRKFRRRKEKGDLTGENDSPNPSALCKAGLKTLQ
DLGPEMRLALNEDLEEEEEEEAMMEDEEMEENAAYKAENGYAEKDRRGSLLTPTGQGGVV
GDGGVSNGGLIHRVGSLTKMANGSDQDEHLRRGDSMRSSINRHPYRRSSVKNGLLDHGHK
RPSYYKGRRDSRDRSWRNGDMEAYGEQGYYSREEDNDSITSRDRHYPDEPPLYRDHYDGH
ASYTNSSYGNGYSEGRRTTRRRLLPATPTGRKPSFNIQCLRRQGSSDDLPIPGTYHPTSP
PRRTRTQQTFNSFESRHSSGRSTAASSASWANPCPRRGRLLYAPLILVEEEGSPPWGGGG
GPAGEIKKGGAGRGVSVTGAAPRPAWYGGPAGTSAPPPYRAYTTLRVPSHLGAPFTEKRG
SADSLVEAVLISEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGSGSHSFLS
NAASDHAALYSDEEPIRTGHDEDELADEMTCVTSF
NT seq
6228 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaggagaaccaccgaagttctggtcgtaatggctacgccaaagctgtggatggg
gaggaaggagggggcgagggtgaggaagaggaggagggaggagaagtggatggaagagag
gacagagaagaaggaggaggtgaggagagtaacgccgagtgggatcaagagctggatgga
gaggatgaaggaggtgtgaggatgacaagaacagacacgcttcactcgaccacaagttca
acgggaacgcagagaaaaagaggacaacacgctaagaaacaggtgcagggcactaatcag
gtccagcgagctccccgggcattatactgtctgaaactcaacaacccaatcagacgggct
gcgctccatattgtcgagtggaagccatttgacatcttcatcctgttggccatctttgca
aattgtgtcgccctgggagtttccaaaccatttcctgaggatgactccaactccaccaac
catgatctggaacaagtagagtatgtcttcctcatcatcttcaccgtggagaccttccta
aagattctggcctacggtctggtgatgcaccccagctcctacatccgcaacggctggaac
ttgctcgactttgtcatcgtcatagttggcttgttcagtgttgtcctggagacaatgact
cataagtcaagtggcgagcaagcaacaacccatcacatgcctgggaaacctggaggtctg
gatgtcaaagctctaagagccttcagagtcctgcggcccctcagactggtttctggagtc
cccagtctgcagattgtgttgaactccatcatgaaggcgatggttcctttgcttcatatt
gctctgctggttctcttcgtcatcatcatctatgccatcatcggtctggagctcttcatc
ggacgcatgcacaggacctgctactatataggaacagataattatgtggaggatgacccg
gtgccgtgtgcgtttgctggtcatggccgtcagtgcatcataaatggctcagagtgtcgg
ggaaggtgggatggtcccaatggaggaatcacaaatttcgacaacttcttcttcgccatg
ttgaccgtgttccagtgcatcaccatggagggatggactgacgtgctgtactggatgaac
gatgccattgggtttgagctgccgtgggtgtattttgttagcttggtgatttttggctcc
ttctttgttctcaacctcgttctgggagtcctcagcggagagttcagtaaggagagggag
aaggcaaaggctcgtggtgatttccagaagctgcgagagaagcagcagatggaggaggat
ctgtgtgggtacatggactggatcactcaggctgaggacatggatgaactggacgaggat
ggaaacccacggccgtctctgggcgatctggccgataagaagagagggaagtttggatgg
ttcagtcactccaacgaaactcatgcgagtcttcctgccagtgaaacagcgtctgaaaac
acagagaacatcgatgaggaacacaccaactgctgccaggcctgctgtgctcagatgatg
aagatcggctgctgtcggacgttacgtcgctggaatcgagtctgtcgcagaaactgtcgc
actgccgtcaaatccgtaactttctattggctggttttgctgctggtcttcctcaacacc
tccctcagcgcctccgagcactataaccaaccagattggctgactcaagtccaggacatt
gccaacaaggtgctgctgtctctctttacggtggagatgttgctgaagatgtacagtttg
ggtctggcccattactttgtggcgttctttaatcgtttcgactgcttcgtggtgtgcggt
ggcatcgtggagaccatcctggtggagctggagatcatgcctcctctggggatctctgtg
ctgcgctgcgtccgtctgctgcggatcttcaaggtgacacggcattggacggctctgtcc
aacctggtggcatcgctgctgaactccatgaagtccatcgcctcgctgctgctccttctt
ttcctcttcctcatcatcttcgccctgctcggcatgcagctgttcggaggaaagttcaac
tttgatgaaacgcagaccaaacgcagcacatttgacgctttcccgcaggcgctgctcacc
tgtttccagatcctgacaggtgaggactggaacatggtcatgtatgacggcatcatggcg
tacggcggccccgtgtttcccgggatgatcgtctgtatttactttgtcatcctcttcatc
tgtggtaactacatcctgctgaacgtcttcttggctatcgccgtggacaacctggcagga
ggagacagtgatgacaagaaaaaagataagaagcaggagggagcagaggaggaagctaca
gaaggagaagtgaaggtcgatgttgatgaagacactgagtatgaagaggaagaggagctt
cctgaaggagatgaagacggaggagtccagttaaagatggccgatcttgctcctcctaaa
gagaaggttctcccgatcccagaaggaagcgccttcttctgcctcagcaagacaaaccct
atccgtgtggcctgccacactctgatccaccaccacatcttcaccaacctcatcctcgtc
ttcattatcctcagcagctgctcattggctgccgaggatccgatcagagcccactccttc
aggaacaatattctgggctatgcagactacgcctttacctccatcttcactgtggagatt
ctgttaaagatgacggtccacggagcgttcctccatcagggctcgttctgcaggaactgg
tttaacttgttggatctcctggtcgtcagcgtctctttggtctccttcttcctgcattcc
agtgccatctcagtggtgaaaatcctcagggtcctcagggtgctccgacctctgagggcc
atcaacagggccaaaggactcaagcatgtggtccagtgtgtgtttgtggccatcaggacc
atcggaaacatcatgattgtcacaaccctgctgcagttcatgttcgcctgtattggagtc
cagctcttcaaaggtaaattttaccgctgcaccgacgaagccaagcacacccccgaacag
tgcaaagggaccttcgtggtgtacaaagatggagacgtgagccatccgatggtcagggag
aggatctggatgaacagtgactttaactttgataacgtcttgatggggatgatggcgctc
ttcaccgtgtccacctttgagggctggcctgctctgctctacaaagccatcgacgccaac
ggcgagaactctggtcccatctacaactaccgggtggagatttccatcttcttcatcgtc
tatatcatcatcatcgccttcttcatgatgaacatctttgtgggttttgtcatcatcacc
ttcagagaacagggagagcaagaatataagaactgtgagctggacaagaaccagcgtcag
tgtgtggagtacgctctgaaggctcagccgctgaagctttacatcccgaagaatccggtt
cagtataagttctggtccatcatcaactcgacaggatttgaatacgtcatgttcgtcctg
attcttctcaacactgtcactctggccattcagcactatgaacagtccaaaaccttcagc
tacatcatggacatcctcaacatggtgttcactggactcttcactttggagatgctgctc
aagctggcagctctcagaataaggcattactttgttgacgcctggaactcgtttgatgct
ctgattgtggtcggcagtgtggtcgacatcgttgtcacggagttcagcagtggagaggac
agctccagggtgtctatcaccttcttccgcctgtttcgagtgatgcgattggtcaagctg
ctgagtaaaggggagggcattcgtacactcctgtggactttcatcaaatcgctgcaggct
ctgccatacgttgctctgcttattgccatgatcttcttcatctacgctgtcatcggcatg
cagacatttgggaagatagcgatgcaggattacactcagatcaacagaaacaacaacttc
cagacatttcctcaggctgttctcctcctcttcaggtgtgctaccggtgaggcatggcag
gagatcatgctagccagtcttccaggtaaacgctgcgaccccgagtcagactacgaacca
ggggaggagttcagctgcggcagcaacttcgccattgtttatttcatcagcttctttatg
ctgtgcgctttcctgattatcaacctgtttgttgctgtcattatggacaactttgactac
ctgacacgtgattggtcgattctggggccacatcatttggacgagttcaagaggatctgg
tcagaatatgatccagaggccaaaggtcgaataaaacacctggacgttgttgcactgctg
aggaggattcagcctcctctgggttttgggaagctttgccctcacagagtcgcctgcaag
cgtctggtagcgatgaacatgcctctgaatgctgatgggatggtgaccttcaatgccacg
ttatttgctctggttcgcactgcacttaaaatcaagactgaaggtaaccctgagcaggag
aacgaggagctgagggtgatcatcaagaagatctggaagagaatgaagccaaaacttttg
gacgaagtcataccgccacatgaagaggaggaagtaactgttgggaagttttatgctact
ttcctcatccaagactacttcaggaagttcaggaggaggaaagaaaaaggagatctgacc
ggagagaatgactcacccaatccatctgctctctgtaaagctggtctgaagactctgcag
gatctgggtccagagatgcgcttggctctgaacgaagacctagaggaggaggaggaggag
gaggccatgatggaggacgaggagatggaggagaatgctgcatataaggctgaaaatggt
tatgcagagaaagatcggcgaggctcattactgacacctactggtcagggcggtgttgtg
ggtgacggcggcgtctctaacggaggtctgatacaccgggtcgggtctctcaccaagatg
gcaaacggcagcgatcaggacgaacatcttcgccggggagacagcatgaggtcatccatt
aatcgacatccctaccgccgctcatccgtgaagaacggcctgctggaccatggccacaaa
agaccgtcatactacaaaggaagaagggactcgcgggacagatcgtggaggaacggagac
atggaggcttatggagagcagggttactacagcagagaagaagacaatgacagcatcacc
tccagagacagacattatcctgatgagcctcctctgtacagagaccattacgatggccac
gcctcctataccaacagtagctatggtaacggctacagcgaggggaggaggacgaccaga
agacgcctacttcctgccacgcccacaggtcggaagccgtcatttaacatccagtgcctg
aggaggcagggcagcagcgacgacctgccgatccccgggacctaccacccgacatcgcca
ccacgtcgcacgcgcacacagcaaacgttcaacagcttcgagtctcgtcactcctccggt
cgctccacggcggcctcctcggcatcctgggcgaacccgtgccctcgccgcggtcgcctc
ctctacgctcctctaatcctggtggaggaggaaggaagcccaccctgggggggaggagga
ggacctgcgggtgaaataaagaagggaggagcaggaagaggtgtcagcgtgacaggtgcg
gcacccagaccagcctggtacggcggccctgccgggacatcagctccgcccccatacagg
gcatacaccaccctcagagtcccctctcaccttggagcaccgttcactgagaaaagaggg
tcagctgacagtctggtggaggcggttctgatctcagagggcctcggtctttacgctcgg
gatccaaagtttgtggcatttgcaaagagggagatcgctgacgcgtgccacatgacagtg
gatgagatggagtcggctgccagcgaccttcttggctcagggagccacagctttctcagc
aacgctgccagcgaccacgctgcactctacagtgatgaggagccaatcaggacaggccat
gacgaggatgagttggctgacgagatgacctgtgtgacatcattctga
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integrated database retrieval system
