KEGG   Oreochromis aureus (blue tilapia): 116336502
Entry
116336502         CDS       T07295                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116336502 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116336502 (exosc5)
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116336502 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116336502
NCBI-ProteinID: XP_031616266
Ensembl: ENSOABG00000017101
LinkDB
Position
LG14:complement(6803262..6809240)
AA seq 219 aa
MEVCGSLTVSLREFGCEQSLLSRPDGSASFVQGDTSVMAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVRERSQEQCVRETCEASLLLTLHPRSSLTLILQVLHDDGSLLSCCLNAA
CMALMDAGLPMSCLFCGVTCAISTDGQIITDPTAAQEKESRALMTFAIDSAKHSVLMSST
KGSFSVHELQQCIAVSQKASEKIFQFYRDSVKRRYSKSR
NT seq 660 nt   +upstreamnt  +downstreamnt
atggaggtctgcggctccctgactgtttctttgagagagtttggttgtgaacagagcttg
ctgtctcgacctgatggctctgcttccttcgtccaaggagacacgagtgtgatggctgga
gtgtacggaccagctgaggtcaaagtcagcaaggagatctatgaccgggcgaccctggag
gtgttggtacagcccaaagtggggttgccaagtgtaagggaacgatcgcaagagcagtgt
gtgcgagaaacctgtgaggcttctctgctcctgacgctccatccacgctcctcgctcact
ctcattcttcaggtcctgcatgatgatggttcactgctgtcttgctgtttgaatgctgca
tgtatggctcttatggatgcaggattgcccatgagttgcctcttctgtggagtgacttgt
gccatcagcacagatgggcaaatcatcacagatcccactgcagctcaggaaaaggaaagt
cgagctttgatgacttttgcgatcgacagcgcaaaacacagcgttttgatgtcgtcgacc
aaaggatcgttttcagtgcacgagctgcagcagtgcatagcagtcagtcagaaagcatca
gagaagatcttccagttctacagagactctgtcaagcggcgatactccaaaagccgatga

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