Oreochromis aureus (blue tilapia): 116336502
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Entry
116336502 CDS
T07295
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116336502 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116336502 (exosc5)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116336502 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
116336502
NCBI-ProteinID:
XP_031616266
Ensembl:
ENSOABG00000017101
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All DBs
Position
LG14:complement(6803262..6809240)
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AA seq
219 aa
AA seq
DB search
MEVCGSLTVSLREFGCEQSLLSRPDGSASFVQGDTSVMAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVRERSQEQCVRETCEASLLLTLHPRSSLTLILQVLHDDGSLLSCCLNAA
CMALMDAGLPMSCLFCGVTCAISTDGQIITDPTAAQEKESRALMTFAIDSAKHSVLMSST
KGSFSVHELQQCIAVSQKASEKIFQFYRDSVKRRYSKSR
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggtctgcggctccctgactgtttctttgagagagtttggttgtgaacagagcttg
ctgtctcgacctgatggctctgcttccttcgtccaaggagacacgagtgtgatggctgga
gtgtacggaccagctgaggtcaaagtcagcaaggagatctatgaccgggcgaccctggag
gtgttggtacagcccaaagtggggttgccaagtgtaagggaacgatcgcaagagcagtgt
gtgcgagaaacctgtgaggcttctctgctcctgacgctccatccacgctcctcgctcact
ctcattcttcaggtcctgcatgatgatggttcactgctgtcttgctgtttgaatgctgca
tgtatggctcttatggatgcaggattgcccatgagttgcctcttctgtggagtgacttgt
gccatcagcacagatgggcaaatcatcacagatcccactgcagctcaggaaaaggaaagt
cgagctttgatgacttttgcgatcgacagcgcaaaacacagcgttttgatgtcgtcgacc
aaaggatcgttttcagtgcacgagctgcagcagtgcatagcagtcagtcagaaagcatca
gagaagatcttccagttctacagagactctgtcaagcggcgatactccaaaagccgatga
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