Osmia bicornis bicornis (red mason bee): 114872707
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Entry
114872707 CDS
T06109
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114872707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
obb00536
]
114872707
Glycosaminoglycan binding proteins [BR:
obb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114872707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
114872707
NCBI-ProteinID:
XP_029036046
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MGPKALQLATAFVVFQFLFLRVDSVRTKLRKQRSRPVQAQEPANGDYNYDYYEGYDDYDE
RNETGTTTTSPPITSVGTNTANRGGLSPEGLQTLYRASLSTDLPTPTPTRFFHQARTDFV
TESYTTPARDHPAQTEIAPDESNLISSVAIPGPRGEPGRPGDSGRPGDAGFPGQPGNPGI
PGPPGPPGPVPDVIGPVGPRGPPGSPGPPGPQGFQGVRGEAGEPGSPGPPGAPGPRGLSG
LPGKDGNVGEDGEAGPPGSIGPVGPRGLPGMPGLPGVKGHRGFPGLDGAKGEQGVSGDKG
SSGAPGPMGPVGPIGPAGPRGERGREGPPGPPGIRGVDGIPGPSGQPGAVGKPGPPGFPG
NPGVKGDQGLQGLKGSQGLQGPRGETGRPGQPGESGPQGPSGKDGIPGEKGSIGAPGLVG
PPGFPGARGQPGISGNPGIPGAKGAPGHPGERGFKGDAGAKGDTGSPGPRGIPGPPGNEG
KRGKRGMRGAVGAPGPTGERGGPGAPGLPGPDGPMGPKGQPGERGPLGPIGPKGATGDPG
RLGPPGLQGIRGLMGRPGAPGKPGNPGERGIQGADGKPGEHGPPGLQGLPGPIGLQGEKG
YPGESGKAGEPGNPGPPGPRGDTGKEGPPGLQGSPGPSGADGERGPPGPSGARGFQGFPG
ATGNPGSPGKDGEPGIQGPIGPPGIPGNRGERGFPGERGTPGAPGLTGPKGEAGSQGADG
FPGLPGPKGDRGIPGPSGLVGLPGLRGSPGEAGPKGDRGSSGPPGPEGPPGRIGERGPQG
QIGPPGPPGEPAERGDPGLPGPPGEVGAFGSPGERGPQGLQGLQGFPGQQGLIGLPGLKG
DRGYPGLKGDQGNPGPPGSPGEAGPQGLTGLTGAKGVRGEPGARGEPGIMGPPGVPGLVG
PAGLPGPAGSPGPSGLPGIKGNSGEAGRPGNPGPIGNPGIPGTDGSKGESGSQGPPGSPG
PQGSQGTPGERGLPGLPGPSGPVGARGIRGPPGESGTPGKPGPEGPPGIPGQIGPIGPPG
PLGEVGAEGPTGKPGPPGISGRPGDKGPPGAVGQTGLPGPPGLPGPLGQAGPPGPTGERG
PKGETGPQGVDGQQGPRGKPGPIGLEGPKGERGDEGQKGPKGHRGFTGLQGLPGPVGLPG
EKGMIGFPGPPGKDGDPGPRGSPGRDGSPGPIGLTGNPGPKGPSGEEGRHGPAGPPGPPG
PPGPPGELGLGYDAASLAALLGQGQTKGPDPLIGDEPPRMFSQDMTEKERQEIILKAYKH
LKSTFQKFIKPDGEKNSPAKTCRDLYTAYPNKPSGEYWIDPNEGDARDAILVYCDAKRRA
TCLLPSPVYSPEIRHITEQKEIWLSEMKNGMKITYKADSNQIGFLQLLSKHAYQNITYHC
KNSVAYINSEQETYRQSMKLLTWNDAELISYGNQRLRYKILIDECKLHKVESGKTVLLYE
TDKTVRLPIIDIGLQDIEKSHQSFYIEIGTACYE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaaggccctacaactggccacggcgttcgtcgtgtttcagtttcttttcctg
cgggttgattccgtacggacgaaattgaggaaacaacgctcgaggccggtccaagctcaa
gaacctgcgaacggtgactacaattacgattactacgagggttacgatgactatgacgag
agaaatgaaactggaaccacaaccacgtcgccacccattacttctgttggaactaatact
gcgaataggggtggattatcgccggaaggattacaaaccctctacagagcatcattatct
acggatctaccaacgccaactccaactcgatttttccatcaagcgcggaccgactttgtt
acagaatcgtacactacccctgcacgagatcatccagcacaaacagaaattgcacccgat
gaaagtaacttaataagttctgttgctatacctggaccaaggggtgaaccaggtcggcca
ggagacagtggtcgtcctggcgatgctggatttccaggacagccaggtaatccagggatt
ccaggacctccaggaccgccaggacctgtgccagatgtgataggccctgttggtccacgt
ggcccacctggttcacctggaccacctggaccacagggttttcaaggagtacgaggagaa
gcgggagaacctggatctccgggacctcctggagcacccggtccacgaggactatctggt
ttacctgggaaagatggcaacgtcggtgaagatggagaagctggtccaccaggatcgatt
ggtccagtcggaccaagaggtcttccagggatgcctggtcttccaggtgtaaaagggcat
cgtggttttccaggactagatggagcgaaaggggaacaaggtgtatctggtgataaagga
tcctcaggtgcacctggaccgatgggacctgtaggtcctataggtcctgcaggtccacgt
ggtgaaagaggtagagaaggtccacccggaccaccaggaattagaggagtagacgggatt
cctggaccttctggacaacctggtgcagtaggtaaaccaggacctcctggttttccagga
aatccaggtgtaaaaggtgatcaagggcttcaaggactaaaaggaagtcaaggtttacaa
ggacctcgaggtgaaactggtcgtcctggacagcctggtgaatcaggaccgcagggacct
tcgggaaaagatgggataccaggagaaaaaggaagtataggagcacctggtttggtcgga
ccacctggttttccaggagctcgtggacaaccaggaatatccggcaatcctggtattcca
ggagcaaaaggagcacctggacatcctggtgaaagaggatttaaaggagatgcaggtgct
aaaggcgacacaggaagtccaggaccgcgtggcataccggggcctccaggaaatgaggga
aaacgcggcaaaagagggatgcgcggtgctgttggcgcacctggccctactggagaacgt
ggaggaccaggagcaccaggtcttccaggtccagatggacccatgggaccgaaaggtcaa
cctggagaacgtggtccgctgggtccaattggaccaaaaggtgctacgggggatcctggt
cgtttagggccacccggtcttcagggtattcggggtctaatgggtcgtcccggtgcccct
ggaaaaccaggtaatccaggagagcgaggaattcaaggagctgatggaaaacctggtgaa
catggtccacctgggttacaaggtttacccggtcctataggtctccaaggagaaaaagga
tatccgggcgagtccggtaaagctggagaaccaggaaatcctggtccgcctggacctaga
ggtgatacaggaaaagaaggaccacccggtttacaaggttcacccggaccatcaggagca
gatggtgaacgaggtcctccaggtccttcgggtgccagaggtttccagggttttccaggt
gcaactggtaatccaggatccccaggaaaagatggtgagccaggtatccaaggacccatt
ggcccaccaggtatacctggtaacagaggtgaacgaggatttcctggtgaaaggggtaca
cctggagcaccaggactaacagggccaaaaggagaagcaggatcacaaggagcagatggt
tttcctggattacctggaccaaaaggagacagaggaatcccaggtccatctggattagtg
ggattaccaggtttacgaggttctccaggtgaagcaggtccaaaaggagatagaggatct
agtggcccacctggtcctgagggacctccaggacgcattggggaacgtggaccacagggt
cagatcggtccacctggaccaccaggtgaaccagcagaacgaggggatcccggattacct
ggtcctccaggagaagtcggagcttttggtagtccaggcgagagaggtcctcaaggatta
caagggttgcaaggttttccaggtcaacaaggacttattggattaccaggattaaagggc
gaccgtggttatccaggattaaaaggagaccaagggaatcctggtccacctggtagtcct
ggcgaagctggaccacaaggtttaactggtttaacgggagccaaaggagtaaggggtgaa
ccaggtgctagaggagaaccaggtattatgggacctcctggagtaccgggcttagttggg
ccagcaggtttgccaggtccagccgggtcgccagggccatccggattaccaggcattaag
ggtaatagtggagaagccggacgccctggaaaccccggaccgattggaaatccaggtata
cctggtacagatggaagcaaaggcgaaagtggttctcaaggaccaccaggttcacctggg
cctcagggttctcagggtactcctggtgaaagaggtttacctggtttaccaggtccttct
ggaccggtaggcgctagagggatacgaggaccgcctggtgaatctggaacacctggtaaa
ccggggccagaaggtccacctggaatccctggacaaattggaccaattggacctcctgga
cctctcggagaagttggggcagaagggccgactggcaaaccaggacctcctggaatatct
ggacgtccaggagataaaggaccacctggagcagttgggcaaacagggttacctggtcca
ccaggcttacccggaccattgggtcaagcaggacctccaggaccaactggagaaagagga
ccaaaaggagaaacgggaccacaaggtgtggacggccaacaaggacctagagggaaacca
gggcctataggattggaaggtccgaaaggcgaacgtggtgatgaaggtcagaaagggcct
aaaggtcatcgaggatttactggtttgcaaggtttacctggacctgttggtctaccagga
gagaaagggatgataggatttcctggaccacctggaaaagatggagatcctggacctaga
ggtagtcctggaagagacggtagtcctggtccaataggtttaactggcaatccaggacct
aaaggcccttctggagaagaaggtcgtcacggaccagctggtccacctggtcctccaggt
cctccaggtcctcctggtgaacttggattaggatatgatgctgcttctttagctgctctg
ttaggacaaggacaaactaaaggaccagatccattaatcggtgatgaaccacctagaatg
tttagtcaagacatgactgaaaaagaaagacaagagattatcttaaaagcatataagcac
ttgaagtcaacgttccaaaagttcataaagccagatggtgaaaagaattcaccagctaaa
acgtgcagagatctttatactgcttatccaaataaaccttctggagaatattggattgat
ccaaatgaaggagatgcaagagacgcaattctagtatactgtgatgctaaaagacgggca
acatgtttgttaccaagtccagtatattcaccagaaatcagacacattactgagcaaaaa
gaaatttggttaagcgaaatgaagaatggaatgaagattacatataaagcagatagtaat
caaattggtttcttacaattactatcaaaacatgcatatcaaaatataacatatcactgt
aaaaatagtgttgcatatattaattcagaacaagaaacatatagacaaagtatgaaactt
ttaacatggaatgatgctgaattaatatcatatgggaatcaacgtctcagatataaaatt
cttatagatgaatgcaagttacataaggttgaatcaggcaaaacagtacttttatatgaa
actgataaaactgtaaggttgccaataatagacataggtttacaagacattgaaaagtct
catcaaagtttttacatagaaattggcactgcctgttatgaataa
DBGET
integrated database retrieval system
