Osmia bicornis bicornis (red mason bee): 114878458
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Entry
114878458 CDS
T06109
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
obb
Osmia bicornis bicornis (red mason bee)
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obb04121
]
114878458
Ubiquitin system [BR:
obb04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul2 complex
Target recognizing subunit
114878458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
114878458
NCBI-ProteinID:
XP_029048139
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MMNGVRTQFKVAVTFDRRKITSCNCTCSSRANWCAHVVAVCLHRIHMPTQVCLRAPVSES
LSRLHREQLQKFAQYLISELPQQFLPTAQRLLDELLSVQPSAINSYCGAPDPTAGASAHD
QTSWYLDEKTLHDNIKKILIKFCVPAPIVFSRRQTFRLLEVIPSTKGHGKSDVNYLSTTA
PPAAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRTDRNAIPLLEIITEECMACEQILVW
WFNTKVALLNGTGYGGKHNMNSNVHASQHACSSLCDEIVVLWRLAALNPGLSPAEREMLH
GQFTAWHMKVIDKVTKSRGSSVTHNSHNRNNSGGHKDSLKNDLAVFTGFKSALEACYLDW
EEYTLPGITYTAGSNPMYHCPFTCFRHAGDTRTEVNQVNSSAAVLNCQPPVSHHHGRRPL
SLGLVEFSWREIPRKGPGMSSRNGGGDGNRSSVSSEGFCENETDMPDIPEPQVVLVRRSC
AQLNNCGDTDSQEGGGSESSSNSNVSLKNAQDSDKHRSNASSETHSDSSDSSNNKAACGS
KSEQESDQEKDPSRRPSKDESSSSSSDSPSGDEYHVYYYDPKAVAGTSGSSNKDSKNESQ
ANTAPNASMVLGNLMKTEDPWDILFARAEGLYAHGHTREACILGVQLGEELLANPPNLMI
DEPPAPVKGKKKKQQVNPASHQLTCLASATLAKCCFLCTVLAENPEYHNLAFRVGLFGLE
MARPPANTKPLEVKLAHQESELVGLLKRIPLGPAELAMVRQRAEQLRDGVLRSRGHALLP
IMLASFIFDALNAPRLKRLSSGIDENLGFDAAVAALGLKANVSEADHPLLCEGTRRQRGD
LAITLLVHYKDEPTKVARIMDKLLDRDVHQLIKSPILSSYYTSNPPTKNEMARYLHDEEC
SSPLAGTDPGNGDSVVGTSSRPHSSTSAELETGMSALTVQPQIVQQPVPTRTKETRYKSK
RVYPSIPNQPSEAGAHFMCELAKTVLAKAGGNSSTSLFTQASTSQNHHGPHRALHMCAFQ
LGLYALGLHNCVTPNWLSRTYSSHVSWITGQAMEIGAPAIWFLIESWEGHLTPPEAVSIA
DKSSRGSDPNMVRAAAELALSCLPHAHALNPNEVQRAILQCKEQSDLMLEKACITVENTA
KGGGVYPEVLFQVAKYWYELYLRHTPGGEQQDNMPHDSLQLDLNGVLLVEPGPSVDISNG
QMMPGPAQAVVVTSTQPPPQPYPTHPTITTLAPLGVGMPYAVGPYSFVHPHHSIPTFGGP
MPSHRVTLPPAPPHMQMYHAAFPPHPGHPQHPQHPHHPSQPTQPPSLPQYYTPQPPPPPG
THHLFTMQQPIQVNVQAGVTGPIPGQSNMPGSALVQTQPIISTVRTQPQVHRQTQPFSQQ
QLRSLVAAYRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKWLLRVSKRLGTQYLHQL
CICTVNSIISPFVLHDVALEAAVYLARNNPALVLQHLRSAPLAPLVHKCQQMYIQCMHQK
LYHLTGGDYEDFVNIVCEAKAAFHITPEGHAQFKDWLQSIKRSQSCNKDLWAQINAALQQ
NGK
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcgttagaacgcagttcaaggtcgcagtgacgtttgatcgtcgaaaaatt
acgtcctgtaattgcacctgctcttcgagggctaattggtgcgcccatgtggttgccgtt
tgcctccacaggatacacatgccgacacaggtgtgcctgagagctccggtcagcgaatcg
ttgtcccgtcttcaccgggaacaactgcaaaagttcgctcagtatctgatcagcgagtta
ccgcagcagtttctgcccactgctcaacgtctcctggacgagctgttgtcggttcaacca
agcgccatcaacagttactgcggagcacctgatccaacggctggagcatcggcacacgat
caaacctcctggtacctcgacgagaagactctgcacgacaacatcaagaagatactcatc
aagttctgcgtaccagctccgatagtcttcagtcgacgtcaaacatttcggttgctcgag
gtcattccctctactaagggccacggcaaaagcgatgttaattacctgagcaccactgcg
cctcctgcagctgccgaatggtcctcgctgttgcgaccgttgcgaggacgcgagccggaa
ggcatgtggaaccttctgtcgatagtgcgcgagatgttcaagaggaccgatcggaacgcg
attccgttgttggagatcatcaccgaggagtgcatggcctgcgagcagatcctcgtctgg
tggttcaacacgaaggtagcgttgctgaacgggaccggatacggtggtaaacacaatatg
aacagcaacgtgcacgcgtcccaacatgcctgctcgtctttgtgcgacgagatcgtagtc
ctatggagactggccgctttgaatcccggcctgtcgccggctgaacgcgagatgcttcac
ggtcagttcactgcctggcacatgaaagtcatcgataaggtgacgaaaagtcgaggcagt
tcagtgacgcacaattcgcacaacagaaacaacagcggtggtcacaaggattcattgaag
aacgacctggccgtgttcaccggtttcaagtccgccctggaagcgtgttatctggactgg
gaagagtacaccttaccaggtatcacgtacaccgccggaagcaatcccatgtatcattgt
ccgttcacctgttttcggcatgccggcgatacgaggaccgaggtgaatcaggtgaactcg
agcgcagcagtgttaaattgtcaaccacctgtgtcccaccatcatggaagacgaccgttg
agtttgggcctggtggagttcagttggcgagagatcccgcgaaagggtccaggaatgtcg
tcgaggaacggcggtggcgacgggaatcggagtagcgtcagttcggaaggtttttgcgag
aacgagaccgatatgcccgatatacccgagcctcaggtagtcctcgtcagacgttcttgc
gctcaactgaacaattgcggggacacggattcgcaggagggtggtggcagcgagtcgtcc
tccaacagcaacgttagtctgaagaacgctcaagactcggacaagcaccgctcaaacgcc
tcgtccgagacccatagtgatagtagcgatagtagtaataacaaagctgcctgcggttca
aagagcgagcaggagtccgaccaagagaaggatccctccagaaggccctccaaggacgaa
agttcttcgtccagcagcgatagcccgtctggcgacgagtatcatgtatattattacgat
ccaaaggcggtcgcaggtaccagtggcagctctaacaaagattccaagaacgaatcgcaa
gcaaacaccgcgccaaacgcgagcatggtgttgggtaacttaatgaagacagaggacccg
tgggacatactgttcgccagagcggaaggactttacgcccatgggcacacgagagaagct
tgcatcttgggtgttcaacttggcgaggagttgctggctaatccaccgaatcttatgatc
gacgagccaccggcgcctgtcaaggggaaaaagaagaagcaacaagtaaatccggcgtcc
catcagctcacgtgccttgcgtccgccacgttagccaagtgttgtttcctctgcacggtc
ctcgctgagaatcctgaatatcacaatttggccttcagggtcggtctgttcggcctggaa
atggctagaccgcctgctaataccaaacctttggaggtaaaattagctcaccaagaaagc
gaattggttgggcttttgaaaagaattccactcggtccagcggaattggccatggttcga
caaagagccgagcaactgagagacggggttctcaggtccaggggtcacgcgttgcttccc
atcatgctggctagtttcatattcgacgccctaaatgcaccaagactaaaacgactgtcc
tcaggcattgacgagaatcttgggttcgacgcggcggtcgctgctttggggttgaaagcg
aacgtgagcgaggctgaccatccgcttctttgcgaaggcactcgacgacagagaggtgac
ttggctatcacgttgcttgtccattacaaggacgagccaacgaaggttgccagaataatg
gacaaattattggatcgcgatgttcatcagttaatcaaatcgccaattttgagcagttat
tacacttccaatcctccaacgaagaatgagatggcaagatatcttcacgacgaagagtgt
tcctctcctctcgccggaacggatccaggaaatggtgacagcgttgttggtaccagcagc
agaccgcatagtagcaccagcgcggaattggaaactggcatgagtgcgctcacggtgcaa
ccgcaaatcgttcagcaacctgtgcctactagaactaaagaaacaagatacaagagcaaa
agggtatatccatcgattcccaaccagccatccgaagcaggagcacacttcatgtgcgag
ttagcaaagacggttctagcgaaagctggcggcaacagttccacttcgctgttcactcag
gcatccacgagccagaatcaccacggacctcatagagccttgcacatgtgcgcctttcag
ctcggtctatacgccctcggcctccacaactgcgttactccaaattggctgagtcgcact
tattcgagccacgtgtcctggatcaccggccaggcgatggaaatcggagctccggccatt
tggttcctcatagaaagttgggaagggcatctgacaccaccggaggctgtcagcatagcc
gacaaatcgtccaggggcagtgaccccaacatggttcgggcggccgctgaactcgctttg
tcctgtttaccacacgctcacgcgctcaatccgaatgaagttcagagagcaattttgcag
tgcaaagagcagagcgaccttatgttggaaaaggcttgcatcactgtggagaataccgcg
aaaggaggcggtgtatatccggaagtacttttccaggttgcaaagtattggtatgaactg
tatctcaggcacactcctggtggagaacagcaagacaacatgccgcacgattctttgcaa
ttggatctcaatggagtgcttttagtagagccgggaccatcggtggatatatctaatggt
cagatgatgccaggaccggctcaagcagtggtggttacaagcactcaaccacctcctcaa
ccatatcctacgcatccgactataactaccctggcaccattgggggttggtatgccgtac
gcagtgggcccctacagttttgtacatccccatcactcgattcctacgttcggtggaccg
atgccttcgcacagggtaactctaccaccagcaccaccgcacatgcaaatgtatcatgcg
gcattcccgcctcatccgggtcatccgcagcatcctcaacatccgcaccatccgtcacaa
cccacgcaaccaccatctctgccgcaatactacacaccgcaacccccaccaccaccgggg
actcatcatttgttcaccatgcaacagcctatacaagttaatgtccaagcgggtgtaacc
ggtcctatacccggtcagagcaacatgcccggatcagcgttggttcagacacagcccata
atatccaccgtaagaactcagccgcaggtgcataggcaaactcaacccttcagccaacaa
cagctacgatctctcgtggcggcgtatcgcgttggcatgttggcattagagactctagct
cgccgggtgcacgatgacagaccccaggcgaaatacgcgcggaatccgccgtacggcgaa
gacgtgaagtggttgttgagagtgtccaaacgtctcggtactcagtatcttcatcagctt
tgtatctgcaccgtgaacagcatcattagccctttcgttcttcacgacgttgcactggaa
gcggcggtctacctagctagaaacaatccagctctcgtgttgcaacacttgagatccgct
ccgttggcaccccttgtgcacaagtgtcaacaaatgtacattcagtgcatgcaccagaag
ctgtatcacctgacaggaggggactacgaggactttgtgaacattgtatgcgaagcgaag
gcagcgtttcacattacaccagaggggcatgctcaattcaaggattggcttcagtccatt
aaaagatctcaatcctgtaacaaagatctctgggcacaaatcaacgcggccctccaacag
aacggcaaatga
DBGET
integrated database retrieval system
