Osmia bicornis bicornis (red mason bee): 114880213
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Entry
114880213 CDS
T06109
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114880213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obb03021
]
114880213
03019 Messenger RNA biogenesis [BR:
obb03019
]
114880213
Transcription machinery [BR:
obb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114880213
RNA polymerase I system
114880213
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
114880213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
CTD
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
114880213
NCBI-ProteinID:
XP_029051814
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MSDSEVSNLSDNESDRAGGGSESDQEENRSVKSAAGSDAGSVGERSRSVSRSRSPSRSRS
RSPSRSRSRSRSPSGSEDGRGDEAEEARSGDEELAEAEEEPEGEDLDASSEYDEEEEEED
DDRPRKRKKKEKYRDFIIEEAEVDDEVEDEDEWEEGAQEIGIVGNEVDELGPTAREIEGR
RRGTNLWDSQKEDEIEEYLRKKYADESVASRHFGDGGEEMSDEITQQTLLPGVKDPNLWM
VKCRIGEEKATVLLLMRKFITYQFSNEPLQIKSVVAPEGVKGYIYIEAYKQPHVKASIEN
VGNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQN
QVHLKLLPRIDYTRPRGALRTAQSESEALKRKKKRRPPAKPFDPEAIRAIGGEVTSDGDF
LIFEGNRYSRKGFLYKNFTTSAIIAEGVKPTLSELERFEEAPEGVELDITGGPGTGGAGN
KEDAAVTHSFSTGDNVEVCEGELINLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRK
YFTMGDHVKVVAGRYEGDTGLIVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDS
LGQFQWGDLVQLDAQTVGVIVRLERENFHVLSMHGKVIEARPQGLTKRRENRNAVALDSQ
QNTIQKKDIVKVVDGPHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNK
SNISSMSPVAGFMSPRITSPMHPSGGGFGRGGGGGGGGRGRGRGGGARRDRELIGTTIKI
TGGPYKGNVGIVKDATETTARVELHSTCQTISVDRSHIANVGVPTKDGGFSSYNRTPAYG
VGGQTPMYARDGSKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNT
PARTNDFDGYSMEEGGSPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSAT
ASPSPAGYVATPSPSGTGYTTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGV
GAGIVGGTEWHTTDIEVRIRDSHQDPALAGQQGVIRGISGGMCAVFLPVEDRVVNLVCEE
LEPVVPSRGDRVKVIIGEDREAVGTLLSIDNQEGVVKLNKDEVKMLHLRFLCKMKPSNS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcggaggtgagcaatttgtccgacaatgaaagcgatcgagcaggtggaggc
agcgagagcgatcaggaggaaaatcgctccgtaaaatctgcagctggcagcgatgctggc
agcgttggcgaaagatctcgcagcgtttcccgtagcagaagtccgtctagatctagatcc
aggagtccgtctagatcacgatcacgttctagatcaccttctgggtctgaggatggtaga
ggggacgaggcagaggaagcaagatccggggatgaagagcttgcagaagctgaagaagag
cctgaaggagaagatttggatgcaagcagtgaatacgatgaggaggaggaggaggaagat
gatgacagacctcggaagaggaagaaaaaagagaaataccgtgatttcattatagaagag
gctgaagtagacgacgaagtcgaggatgaagacgaatgggaagaaggtgcccaagaaatt
ggtattgtcggaaacgaggtggatgaattgggtcctactgccagagaaatcgaaggcaga
cgtagaggcaccaacctttgggattctcaaaaggaagatgaaatagaagaatacttgaga
aagaagtatgccgacgagtcggtggctagtcggcacttcggagatggcggcgaagaaatg
agcgacgaaattactcagcaaacattgctaccaggtgtaaaagacccaaacctgtggatg
gtgaaatgccgcatcggagaggagaaagctacagtacttttgctaatgagaaaattcata
acgtatcaattttcaaatgaaccacttcaaataaaatccgtcgttgcaccagagggagta
aagggttacatttacatagaagcttacaagcaaccgcacgtaaaagcttctattgaaaac
gtgggaaatttgagaatgggaatatggaagcaacaaatggtaccaataaaagaaatgacc
gatgtcttgcgcgtcgttaaagagcagacaggcttgaaggcaaaacaatgggttagactg
aagagaggaatttataaagacgacatagctcaggttgactacgttgatttagcacaaaac
caggttcacttgaaactgttgcccagaatcgactacactagaccgcgtggagctttgagg
acggctcagagtgaatccgaagccttgaaacgtaaaaagaaacgaagaccaccggcgaaa
ccgttcgatccggaagcgattcgagcaattggaggagaagtaaccagcgacggtgatttc
ttgattttcgaagggaacagatacagtagaaaaggatttttgtacaaaaattttacgaca
agcgcgattatcgccgagggtgtgaaaccaactctgtctgaactggagaggtttgaagag
gcaccggaaggtgtggagttagacataaccggaggcccaggaactggaggtgctgggaat
aaagaggatgcagcggtcactcattcctttagcacaggggacaacgtcgaggtgtgcgag
ggtgaattaataaacttgcaaggaaagatcgtgtctatagatgggaacatgataatggtg
atgccgaaacacgaggagctcaaagaagcattggagttccaagcttcagagttgaggaaa
tatttcaccatgggtgatcacgttaaggtggtagcaggaagatacgaaggcgacactggt
ttaatagtccgagtagaacaaaaccgcgtggttttattttctgacttatccatgcacgag
ctcgaggtccttccaagggatttacaactctgctcggacatggcaaccggtgtggacagc
ttaggtcaattccaatggggcgatttagttcaattagacgcgcaaacagtaggggtaatc
gttcgtttagagcgcgagaacttccacgtgctctcaatgcacgggaaggtgatcgaggct
aggccccagggtctcacgaaacgtcgcgaaaacagaaacgcggtggcgttagattctcag
caaaatactatacaaaagaaagatatcgtcaaggttgtcgatggaccgcacgctggaaga
ggaggcgagatcaaacacctgtacagaagctttgctttcttgcactcgaggatgttcgtc
gacaacggtggaatattcgtttgtaagacgaggcacttgcaactgtctggtgggaataag
tccaatatatcgtccatgtcaccggtggcaggatttatgtcgcctagaatcacatctcca
atgcatcctagcggtggtggttttggaagaggaggaggcggcggaggtggaggaagaggc
agaggccgcgggggtggagccagacgcgacagagaactcataggaaccaccatcaaaata
acaggaggaccgtacaaaggaaacgtcggcatagtgaaagacgctacagaaacaactgcc
cgagtggagttgcattccacttgtcaaaccatctccgtggacaggtctcacattgcgaac
gtcggcgttccaacgaaggacggtggtttcagcagttacaacaggacacctgcgtacggc
gtgggtggtcagacaccgatgtacgccagagatgggtccaagacacccatgcatggttct
cagacgcctatgtacgaaaatggttcccgtactcctcattatggttcaatgactccatcg
cacgatggctctcgtacaccaggacagtcaggtgcctgggatccagcagtgaccaatacc
cctgcaagaacgaacgacttcgacggttacagtatggaagaaggtggatctcctggctac
gcgccaggttatccaccaaccggtgggccattcacgccccagacacctggtaccatgtac
ggttcggagcaaagcttcagctcgtatcagccgagtcctagtccagcgggaagcgctacc
gcgagtcctagtccggcaggatacgtcgctactccctcgccaagtggtaccggatacact
accagtccccatggagcctttgctacgccctcaccgatgggttacagtcctatgacaccc
ggagttgcaggcagtccatataatccacaaacaccaggtgcaggtctcgacactggcgtg
ggtgctgggatcgtgggaggaaccgagtggcacaccacggacatcgaggttcggatccgg
gactctcatcaggatcctgctcttgctggtcaacagggtgttattcgaggaatatccgga
ggcatgtgcgccgtgttcctaccggtggaagacagggtcgtgaacctggtctgcgaggaa
ctggaaccggtggtaccatctcgcggggaccgagtgaaagtaatcatcggcgaggacaga
gaagcggtcggcacgttgctgtctatagataatcaagaaggcgtcgtgaagctgaacaag
gacgaagtgaagatgttgcacctgcgattcctgtgtaaaatgaaaccatcgaactcgtaa
DBGET
integrated database retrieval system
