Osmia bicornis bicornis (red mason bee): 114880310
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Entry
114880310 CDS
T06109
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb04512
ECM-receptor interaction
obb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114880310
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114880310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obb04147
]
114880310
00536 Glycosaminoglycan binding proteins [BR:
obb00536
]
114880310
Exosome [BR:
obb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114880310
Glycosaminoglycan binding proteins [BR:
obb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114880310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114880310
NCBI-ProteinID:
XP_029052019
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MRPRAAATSTSPARGLHPFPVVLRVTCVLALLVVTWIPVTEAVICRDPYKCDCKGIKGIP
GFIGITGPQGPEGLPGDIGLDGPPGPKGEKGAGGELGGTGEKGYRGDQGIQGFPGSPGLS
GNTGLAGVMGPDGLDGCNGTDGRAGSPGMPGIHGERGPPGPMGDYGPTGEPGDGGINSVG
VKGIRGNPGVDGPEGYPGPYGIPGEIGYPGETGDMGYTGAPGLPGMQGESGETVFGVKGQ
SGEQGDRGEAGPSSDGKFRKTTKSTPVKGVRGNKGMRGDYGDRGRKGEMGAKGPLGRPGF
PGIKGMKGEQGDDGPRGKQGVEGPPGPAGEKGDKGAPGYAGNPGVDGTDGESGEPGNPGP
PGKQGAAGEPGKYIPELDEIIQGNIGIQGDLGPPGKPGEPGTPGLPGKVGYIGPPGPPGP
SGPPGSPGLKGSSVKGEPGDDGLPGVMGSHGPHGLPGLPGPFGPKGYPGITIIGPPGIDG
KPGYPGISGSLGDRGDPGPQGPKGFPGKGIRIRGPPGERGLPGTPGISGRDGRPGEFGVF
GPKGIRGDDCGICSPGLPGPKGESGDAGLNGYPGTPGFPGLPGPRGFKGTQGKPGISGPG
GLEGDSGRPGIAGPQGPKGERGRVILPDRALIGEPGDIGEKGLPGIEGPGGPRGEIGSRG
DTGPPGPKGEKGDHGPPGFSGRNGFPGSDGIPGPKGDDALTPIELLRGEPGLSGSPGFKG
VEGDKGAKGERGQSSQYAIDLKGDRGYKGERGAPGEDGAKGAQGWSGDEGFPGLSGIPGS
PGISPQGPMGLKGYPGMPGEQGLRGPSGTPGPQGPVGFSGRIGNKGNRGDPGTNQTYGNF
GLMGLAGEKGDIGSPGPQGFQGRSGIDGPKGVRGGKGAPGLEGQPGLQGAKGQRGDSVQG
PRGFPGLAGQPGMPGRMGEAGISGPDGPPGFDGMKGLKGEVGFIGRRGDDGDIGPMGYLG
RDGTPGMPGPPGEEGDVGEIGEPGPRGWPGLDGVAGLPGFKGEQGKIGVQGVPGGLGPPG
FKGVSGDAGPDGLDGLPGENSFSGPQGDRGEPGFMGKIGAPGFPGVDGRPGLPGEPGLAT
DGFDGIPGLIGEPGYDGFNGMPGPKGESGDMGPDGLKGPRGDWGFKGRAGTPGIHGRYGG
KGERGPMGPPGFNGPKGRRGLDGDPGQMGLPGMPGDQGPRGLPGLMGTPGPKGQTGDHGL
PSYAEAEKGDFGNPGLEGLPGVKGQRGDQGYIGLPGRKGEKGNEGFYGPDGFPGVPGFPG
LPGDQGPPGFPGAPGDFAERGEAGRPGLDGIPGTPGIPGQKGAPGQYGPNGPKGIRGEIG
LTIRGPKGILGDQGPKGFAGFPGAPGLQGLPSPPGPPGPKGSQGEAGLPGISIKGEQGEP
GLPGFNGRIGSKGERGDTGLPGFTGLPGHKGERGDEGEPGVSGMIGSPGPKGPKGNRGNN
PFSPFPRKGLPGDTGPEGLPGFPGLQGMMGEPGLDGLPGRVGEPGMIGALGLPGPEGKEG
PAGYSGPRGAVGRQGPPGYPGIPGAPAPPAPGPRNRGFHFARHSQSEMIPLCPSNTVKLW
DGFSLLHIMGNGKPYAQDLGAPGSCVRKFSTMPFMFCNINNVCDYANREDYSYWLSTTEP
MPMSMTPIPAPEIGRYISRCSVCEAPTRAIAVHSQTMSIPQCPGGWDELWIGYSFLMHRD
AGAGGGGQSLISPGSCLEEFRARPFIECRSLGTCNYFSTATSYWLATIKDHEMFRKPLPQ
TLKNDHTSRVSRCAVCIRRRVNEDGSQLKPFTSNGQKEPLGNIRYQPQPRYPDYQYPRQG
SPGRTRNPHRRIPYHYRKKGRSRRPDRTTEVPEAA
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctagggctgcggcaacttcaaccagcccagcccgtgggttacatccgttcccg
gttgtcctgcgagtcacctgcgtccttgccctactggtcgtcacgtggataccggtcacc
gaggctgtgatatgcagagatccttacaaatgcgattgcaagggaataaaaggtattcct
ggatttattgggatcactggaccacagggaccggaaggacttccgggtgacatcggtctg
gatggtcctcccggtccaaagggtgagaagggagctggtggagaactgggtggaactgga
gagaaaggatacaggggtgaccaaggaatccaaggttttcctggatctccaggactgtcg
ggtaacactggcctagccggtgtaatgggaccagacggtctggacggatgcaacgggacc
gatggacgtgccggttcaccaggaatgcccggtatccatggtgaacgtggcccaccaggg
ccaatgggagattatggacccactggtgaaccaggtgatggtggtatcaactccgtgggc
gtgaagggtattcgtggaaatccaggtgttgatggaccagagggttacccaggaccatac
gggattcccggtgaaattggttatccaggagaaaccggcgacatgggttatactggtgcc
cccggattaccaggcatgcaaggtgaatccggtgaaacagtgttcggtgtgaaaggtcaa
tcaggtgaacaaggtgacaggggagaagctgggccatcgagcgacggtaaattcaggaaa
acgacgaaatccacaccggtgaaaggtgtaaggggtaacaaagggatgcgaggagattac
ggagatcgtggccgaaagggagagatgggtgctaagggtcctctaggtcgaccaggcttt
cccggcatcaaaggtatgaaaggagaacaaggtgacgacggtccgagaggtaaacagggt
gtagagggtccgccaggacccgcaggagaaaaaggagataaaggagctccaggttatgct
ggtaatcctggagtcgacggaactgatggtgaatcaggagagccaggaaatcctggacca
ccgggtaaacaaggagctgctggagagcctggaaaatatataccagaactggacgaaata
attcaaggaaatattggaattcaaggggacttaggaccacctggtaaaccaggagagcca
ggaacgcctggtttacctggaaaagtaggttacatcgggccacctggtcccccgggacct
tcaggtcctcccggctcgccaggattaaaaggatcttccgtcaaaggagagccaggagac
gatggtcttcccggagtaatgggttctcatggtcctcacggtttaccgggtttacctgga
ccttttggaccaaaaggatatcctggaataacgatcattggaccgccaggtattgacggt
aaacctggatatcctggaatttctggatcacttggagatcgtggtgatcctggtccacaa
ggtccaaaaggtttccccggaaaaggaatcagaattcgtggtccaccaggcgagcgtggt
ttaccaggaacaccaggtatctctggacgcgatggaaggcctggtgaatttggtgtcttt
ggcccaaaaggtatccgaggtgacgattgcggcatttgttcaccaggattacctggccca
aaaggtgaaagcggtgatgcaggactgaacgggtatcctggaacaccaggatttccagga
ttgccaggtccccgtggattcaaaggaactcaaggcaaaccgggtatttccggtccagga
ggattagaaggcgacagcggaagaccaggtatcgctggacctcagggaccaaaaggagag
aggggaagagtaattctaccagatcgtgccttgatcggagagcctggtgacatcggtgaa
aaaggattgccgggtatcgaaggacctggaggtccacgaggtgaaattggctctcgcggt
gacacaggacccccaggacccaaaggagaaaagggtgaccatggtcctccaggattttcg
gggcgtaatggttttccaggctcagatggtattcccggtccgaaaggtgacgacgctttg
acaccaatcgaattgttgcgtggagaaccaggcctttcagggagtcctggttttaaaggt
gtagaaggtgataaaggtgcaaaaggagaacgtggacaatcctcgcaatacgctattgat
ctgaaaggagacaggggatacaaaggagaacgaggggctccaggagaggacggtgctaaa
ggagctcaaggatggtcaggtgacgaaggatttcctggattatctggaattccaggatcc
cctggtatatcacctcaaggtcctatgggtttgaaaggataccccggaatgccgggagaa
caaggtctccgtggtccatcgggtacaccgggaccacaaggacctgttggtttttcgggt
cgcataggcaacaagggtaaccgcggtgacccgggtacgaatcaaacgtacggtaatttc
ggattaatgggtttggctggtgaaaagggagacattggtagtcctggaccacagggtttc
caaggtagatctggaatagacggaccgaagggtgtgagaggtggtaaaggtgcccctggc
ttagaaggtcagccaggactacagggtgctaaaggtcaacgaggtgatagtgtgcaagga
cctcgaggcttccctggactagctggccaacctggaatgcctggaagaatgggagaagcc
ggcatttcaggacccgatggaccacctggatttgatggaatgaagggtcttaaaggtgaa
gttggattcatagggcgtcggggtgacgatggtgacattggtcccatgggttatttggga
agagacggaacgcctggtatgccaggtcctcctggcgaagagggtgacgttggtgaaatc
ggtgaacctggtcctcggggttggcccgggttggacggagttgcggggctaccaggcttt
aaaggggaacaaggaaagatcggtgtgcaaggtgttccgggcggtcttggaccacctggc
tttaagggtgtctccggagatgctggcccagatggtttggacggacttccgggtgaaaac
tcgttcagcggacctcaaggtgatagaggtgaacccggtttcatgggaaaaatcggtgcg
cctggattccctggcgttgatggacgacctggactacctggtgaacctggtctggcaact
gatggattcgatggcataccaggattgataggtgaacctggttacgatggattcaatgga
atgcctggaccaaaaggagaaagtggtgatatgggtcctgatggtttgaaaggaccaaga
ggagactggggattcaaaggaagagcaggaacccctggtatccatggtaggtatggtgga
aaaggtgaacgaggtccaatgggtccgcctggtttcaatggtcctaaaggtagacgagga
ctggacggtgatcctggtcaaatgggtctaccaggaatgcctggagatcaaggtcctcga
ggattacctggtttgatgggtacaccaggaccaaagggacagacaggtgatcatggtctg
ccatcatatgctgaagcagagaaaggtgatttcggaaatcctggtctcgagggtctacct
ggagtaaaaggacaacggggtgatcaaggctacataggattacctggtcgtaagggtgaa
aaaggtaatgagggattttatggaccagatggattcccaggtgtgccaggattcccagga
cttcctggtgaccaaggacctcctggttttccaggagcacctggtgattttgctgaacga
ggagaagctggacgacctggattggatggaataccgggtactcctggaattccaggacaa
aaaggtgctccaggacaatatggacccaatggccctaaaggaattcgtggagagattggt
ctaaccattcgtggccccaaaggaattctgggagatcaaggtccaaaaggattcgctggt
ttccctggggctccaggattacaaggattaccaagtccacctggaccaccaggaccaaag
ggttctcaaggagaagctggacttcctggaatctctattaaaggagaacagggtgaaccg
ggactgcctggattcaatggtagaataggatcaaagggagaaagaggcgacacgggtctt
cctggatttacaggactgcctggacataaaggagaacgcggggatgagggcgaacctggt
gtatctggaatgataggttctccaggtccaaagggaccaaaaggaaatcgaggtaacaat
ccattctcacctttcccaaggaaaggactacctggagacacaggacctgaaggattacca
ggtttccctgggctgcaaggaatgatgggtgaaccaggcctagatggactgcctggaaga
gtaggagaacctggaatgattggggcattaggacttccaggaccagagggcaaagaaggt
cctgctggttattctggtcctcgtggtgccgttggacgtcaaggacccccgggataccct
ggaatcccaggagctccagcacctccagcaccaggaccacgaaacagaggtttccatttt
gctcgacattcgcaatccgaaatgataccactctgtccatcaaacactgtgaaattatgg
gatggtttctctttgttgcacataatgggcaatggaaaaccatacgcgcaagatcttggt
gcgcccggaagttgcgtgaggaagttctccaccatgcctttcatgttctgtaacatcaac
aacgtatgcgattacgcgaatcgtgaagattacagttactggttaagtacaactgaacct
atgcctatgtccatgacgccgataccggcaccggaaatcggcagatacatttccagatgt
tctgtttgcgaggcaccgactcgcgcaatcgcggtccacagtcaaaccatgtcgatacca
cagtgcccgggtggttgggatgaactctggatcggatatagtttcctcatgcacagagac
gcaggtgcaggtggtggaggtcaatccttgatctcccccggatcatgtctcgaagaattc
cgtgctagaccgtttatagagtgtcgaagtctcggcacctgcaactacttttccactgcc
acatcctactggctggccaccatcaaggaccacgaaatgttccgtaagcctctgccacag
accttgaagaacgaccatacgtcacgagtcagtcgctgtgcagtctgtattcgtcgtcgc
gtcaacgaggacggtagtcagttgaaaccattcacgtcgaacggacagaaggagccacta
ggcaacatccggtatcaacctcaaccacgctatcctgattatcaatacccgaggcagggt
tctccaggaagaacaagaaatccgcacagacgcataccgtaccattaccgaaagaaagga
cggtcccgtagaccggaccgaacgacggaggttccggaagctgcctaa
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integrated database retrieval system