Octopus bimaculoides (California two-spot octopus): 106874328
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Entry
106874328 CDS
T04127
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03030
DNA replication
obi03410
Base excision repair
obi03420
Nucleotide excision repair
obi03430
Mismatch repair
obi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106874328
03410 Base excision repair
106874328
03420 Nucleotide excision repair
106874328
03430 Mismatch repair
106874328
03440 Homologous recombination
106874328
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obi01009
]
106874328
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obi03032
]
106874328
03400 DNA repair and recombination proteins [BR:
obi03400
]
106874328
Protein phosphatases and associated proteins [BR:
obi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106874328
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
106874328
DNA repair and recombination proteins [BR:
obi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
106874328
MMR (mismatch excision repair)
DNA polymerase delta complex
106874328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
RET_CLD4
Motif
Other DBs
NCBI-GeneID:
106874328
NCBI-ProteinID:
XP_014777503
EnsemblRapid:
LOC106874328
LinkDB
All DBs
Position
5:complement(23026696..23056319)
Genome browser
AA seq
477 aa
AA seq
DB search
MASTSSLDTMYLDNLDEYINDENKVVTYRWLSITLQVHVNLAKQMLFNFVKQQRSEKDSD
CLHVTYFVAGITDKRKDGTKVVFCSVVPEEKLETVKSSLQQLHSCHIYSVQKSKLKDSSV
LYITDYQEMKENEIESSRYSAVKYDAAQKIERKVKTEDAQPNSPLKTSNETSIKTNRDNN
NNNNNNNNSSTNNSKNSVTKSVIAGMFAQCNKNNISKQASTDQSSNNSEPKKEQAAKKVS
KKPTGVLSFFSSAGKSESIEIKSENTEPSRNTSNNKQNEVKKSLQESDSEDDMFQEKKRR
RIVRNISSDEEDMFQKKKRHRIVPNSSSEEEMESEEPLPSPPSPEMMPTDADIKDDTMEG
SSAAVENGCEQNTEETAVRETESRVVVNKDGKRRKRIKRQKNKTFIDDEGFMVTKKVMVS
DSTDVSDEETEKNSKPPTTAAPVVLSAAQLKKPASKTSVPDKGQKKQSSLMSFFNKK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacatcttctctcgatacaatgtatctggataatttagatgaatatatcaat
gatgaaaacaaagttgtgacctaccgttggttaagcattaccttgcaagtacatgtgaac
ctagctaaacagatgttattcaactttgtgaagcaacagagaagtgaaaaggattctgat
tgccttcatgtcacctattttgtggcaggaataacggataaaaggaaggatggaaccaaa
gtggtcttttgtagtgtggttcctgaagaaaaactggaaactgttaaaagctctcttcaa
caattacacagttgtcatatatatagtgttcaaaagtccaaattaaaggattccagtgtg
ctatatattacagattaccaggaaatgaaagaaaatgagattgaatcatccaggtatagt
gcagttaagtatgatgcagcacaaaagatagagaggaaagttaaaactgaggatgctcaa
cctaattctcctttaaagacatctaatgaaacgtccattaaaacaaatagagacaacaat
aataataacaacaacaacaataacagcagcactaacaattccaagaattcagttacaaaa
tcagtaattgctggaatgtttgctcaatgcaataagaataatatttccaaacaagcatct
acagatcagagtagtaataattctgaaccgaagaaggaacaggcagctaaaaaggtttca
aagaaaccaactggtgtgctctctttcttttcttctgcaggaaaatcggagagcattgag
atcaaatcagaaaatacagaaccatctagaaatacttctaataataagcagaatgaagtc
aaaaaatctcttcaagaatctgattcagaagatgatatgttccaagaaaagaagcggcgc
cgcattgtccgaaatatcagtagtgacgaagaagatatgttccaaaaaaagaagcggcac
cgcatagtcccaaatagcagtagtgaggaagaaatggaatcagaggaaccacttccaagt
ccacccagtccagagatgatgcccactgatgctgatattaaggatgacacaatggaagga
agttcagctgctgtagaaaatggctgtgagcaaaacactgaagaaacagcagtaagagaa
acagaatctagagttgttgttaataaagatggaaaacgaaggaaacggataaaaagacag
aaaaataagacttttatagatgatgaaggttttatggttacaaagaaagttatggtcagt
gactcaactgatgtctctgacgaggaaacagaaaaaaactctaaaccaccaacaacagct
gcacctgttgtactgtcagctgctcagctcaagaaacctgcctcgaaaacaagtgttcct
gacaaaggacagaagaagcagtcatccttgatgtcattttttaacaaaaaataa
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