Octopus bimaculoides (California two-spot octopus): 106874583
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Entry
106874583 CDS
T04127
Name
(RefSeq) synaptonemal complex protein 2 isoform X1
KO
K19529
synaptonemal complex protein 2
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obi03036
]
106874583
Chromosome and associated proteins [BR:
obi03036
]
Eukaryotic type
Meiosis-specific proteins
Synaptonemal complex
106874583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYCP2_SLD
Cor1
Motif
Other DBs
NCBI-GeneID:
106874583
NCBI-ProteinID:
XP_052826218
EnsemblRapid:
LOC106874583
LinkDB
All DBs
Position
8:91349983..91585182
Genome browser
AA seq
1989 aa
AA seq
DB search
MKILWRSKSTAAMEESADLVFNSQNIMSFKSSEYDINDFLESLHQGIFQKTLQYQTCLKQ
LTHVFSWLLGELEENPSVIPDLTSQGILDLCSDCITIFLELSEEQKLNPLSLPVFEHILE
IVIVIANTSTEIRCTLVLKFTDLLMDCILKGRLPFLIRLQALKYSNLLFERCPSSVKENL
NLKPQHQNNLKSIIKLISTVGDYEFQVAIVEYTFRSISKKCRSQNLSNLSDPNIFSFINS
IKDETFESDCRKCFNAFNSNQGMYQRVFSVPCNAIYFGKLKLNKPKDESYKYFWVDFNVT
SQRVTFYCEQVNGSEDPECEEDVWETVSICKEDVMEIIYEVSEDDQLAIIYFLFFPSMKE
ILPGHTLKKGSSMKMTFQDKDAVCKGIQEIFCNPKCSVAQKAIPINDGYKKDSHQKVRVE
RSPYEHVLNESFNSSTMKTMRKCSVPSECMTTPLMIKVQKLKPETQNEKPAKDIKNTPRK
NAIIVSEVSQSSKNTDRRRTNSPKIKNNYGVVSERNNQELKEKGKKITATMPSNSPDSNS
PKTELTNTKSGQRLSAKKPALNQPLKTYEKVSSTRRSSRINIKHQDLPSPQKKATPPKSP
RKLRSRTRNNKMTMSQESSSDFVTSSTAKVAGREKENMLKNTSSLKPYERSSRIKQNVGS
TPVLDISNNSCKKTEQAKKIPDTRDNSALTSVENTKTNLDQSHFPVSQCGDNKSQTTTVK
NTSNKTRLRSFDKLNLLPEKYPLRKDNHNKKRPENKTTSNSTATELKESNRSILNNPSIC
TIQETQENCAYEENSIVIPESVPLKQQPLVSRKLANSNTKQTPAFDSGIASSVDIQKQRK
KTVLEKTVIKIAPSSTKDVSIREDPSFIYHSLIQKNSELKSSNIDKIKEINNDVLKEVTK
VTESKQTAVENLSTADNRMKTKRPVKKTFFHFISSDSDANSNNNKTIPSKYSTITEENLK
KFNQQRDKSLVNNLNARIKGFVKSSCETVFQDIDNVDKNQTMKEDEILKDPHHFSTLHKS
RNLDVDLTNDKSPKTTSNTSDHNNNNNNNDNNDNDLSNKSSASSNLSSPVTDPTMRKKSP
ENTNQQQKVASPEKMAQSTEGDQLVNPKTAHNSSKFQTNSKHQSKTKRNIPKGSLSYFSA
QPPKEAHRKSEGSRSPSFKLFEQTPPHQARHKAKRNYRSNKQANLSKLYDPYDFDNISNS
SSNVKQSIRSLSPVISEKRKFFKTRQNTKASNFSNYLDITKRSKPIKESESFLPSTASKK
TKQSLNKKHETSNQTSKSVTLNQTLKYVTSNQTPKSVLDEFNKDQSNETHFNLLTPGRQG
LNNKQRDGSERSDKTSKKVSSISVNSKTAANNARLTRKRKPVNYKEADTSSEDQINDDES
VVSSRSEASMPQKILKTVTREGQSKHKSVSPVSSEHFSSYQKQSLNSKQKAQPLSKQLNQ
TNKRDNQEQKKSNTNTNKIQKISVPSLSGSHFGSSITQNSEISWIAAKKNNHQENQIQKT
YSTKKDKSYFGSYPCIPKSLKSRKKPVKKDSKKLKNYKVLEKELTFHDTEFTCNGSLNCL
TDEEHQVLTRTTTELSHSESINKSLVSFNISEKLLPTNSVLGVHQFQPSCSSSFTAPSKA
TDNLQGTVDIYPRSDSSKCASLVSCVSLASHSSLTSINSKKNQFLDSPLEERILTQEEHH
KLNFQENFSNYQENSSDKSEPNVSLSDHLDNFSGSNLSITSFQKNSMHQQAQMSPKQTSF
WKPSLWDNFTQDKSTKINNFQALPTKTYKKSVTVSVSDESVEVLTAKVSERSSHQYSCTR
ESAYLPTESKSSDNCSNYKSGNIKQLVHSIGTDMKKSIAIKQTNISAITKETLAKTEKAL
LKVWQKDFHSRHDLHKDFESKVFREFERLHREILSSEECRQTLMKTVDEQIENSENCRFS
QMKCLKRLQMLYSQYYTTVCTDNEIKKDKQVEVRNILKTEMTELQKKFLFDATQQEMQQI
RSRLYKILT
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctctggagaagcaaaagcacagcagcaatggaggagtcagcagaccttgtc
ttcaactctcagaatataatgagttttaagtcttcagagtatgacatcaatgacttttta
gaaagtttacatcagggaattttccagaaaacattgcagtatcagacatgtttaaagcag
ctaactcatgtattttcctggttactgggtgaactagaagaaaacccttctgttattcca
gacttgacatcacaaggaattcttgatctgtgttcagattgtattacaatttttcttgaa
ctgtctgaggagcaaaagctgaatcctttatctttgccagtatttgaacatattttggag
attgtaattgttattgctaatacaagtactgaaataagatgtacccttgttttaaagttt
actgaccttttgatggattgtattttaaaaggccgtttgccttttttaattcgtctacag
gctctcaagtattcaaatctattatttgagcgctgtccttcttctgttaaagaaaatctg
aatttaaaaccacaacatcaaaataatttaaaaagtatcatcaagctgatatcaactgtt
ggtgattatgaattccaggtggccattgttgaatacacatttcgatccatctctaagaaa
tgccgctcgcaaaatctctctaatttatctgatcccaatatattctctttcatcaattct
atcaaggatgaaacattcgaaagtgattgcagaaaatgttttaatgcctttaacagtaac
caaggaatgtatcagagagtattctcagttccttgtaatgctatatattttggaaaacta
aagctgaacaaaccaaaagatgaaagctataaatacttctgggttgatttcaatgtcacc
agtcaacgcgtaactttctactgtgagcaagttaatggcagtgaagaccctgagtgtgag
gaagatgtatgggaaacagtcagcatttgcaaagaagatgtgatggaaattatttatgaa
gtatctgaggatgatcaattggctattatatacttcctgttcttcccatctatgaaagaa
attctacctggacatactctcaaaaagggttctagcatgaaaatgacattccaggacaaa
gacgctgtttgtaaaggaattcaggaaattttctgtaacccaaagtgttcggtggcacag
aaagcaattcctatcaacgatggctacaagaaagattcacaccagaaagttagagtggaa
agaagtccttatgagcatgttttgaatgaatcttttaattcttcaacaatgaagaccatg
aggaaatgctctgttccaagtgaatgtatgacaactccattaatgataaaagtacaaaaa
ctgaagccagaaactcagaacgagaaaccagctaaagatatcaagaacactcctagaaaa
aatgcaattattgtgtctgaagtatcccaatcatccaaaaatactgacagaaggagaaca
aactcaccaaagataaagaacaactatggagtagtttctgaaagaaataatcaagaactg
aaggaaaaaggtaagaaaataactgctaccatgccaagcaacagtcctgattcaaatagt
cctaaaacagaactgaccaatactaaaagtggacagagattatctgctaaaaaacctgct
ctaaatcaaccattgaaaacatatgaaaaagtttcatctactagaagatccagtaggatt
aacattaaacaccaggatcttccttcaccacaaaaaaaagctactcctccaaaatctcca
agaaaacttcgttcaagaactagaaataacaagatgacaatgagccaagagtccagttca
gattttgttacaagttcaactgcaaaagttgctggaagagaaaaggagaacatgcttaaa
aacacatcatctttaaaaccatatgaaagatcatctcgaataaaacaaaatgttgggtca
actcctgttttagatatttcaaataattcctgcaagaaaacagaacaagctaaaaagatt
cctgatacaagagacaactctgctttgacatcagtggaaaatacaaaaaccaaccttgac
cagtctcactttccagtatctcagtgtggagacaacaaatcccaaacaactacagttaaa
aacacatctaataagacaaggttgagatcatttgacaagttaaacctgctgccagaaaag
tatccacttcgcaaagacaatcacaataaaaagagacctgaaaacaaaaccacaagcaat
tcaactgcaacagaattgaaggaatcaaatagatcaatattgaacaatccatctatctgt
actatccaggaaacccaagaaaactgtgcatatgaagagaattctatagtcatcccagaa
tctgtgccactcaagcagcaacctctcgtttctaggaaactggctaactccaatactaag
caaacaccggcttttgacagtggtatcgcctcaagtgttgatattcaaaagcagagaaaa
aaaacagttttagagaaaactgttataaaaatagctccttcttcaacaaaggatgtcagt
ataagagaagatccttcattcatatatcattctttgatacagaaaaattctgaattgaag
tccagtaatattgataaaatcaaagaaataaataatgatgttttgaaagaagtaacaaag
gtcactgaatctaaacagactgctgtagagaatttatctacagcagataatagaatgaaa
actaagaggccagttaagaaaacgtttttccatttcataagttctgatagtgatgctaat
tctaacaacaataaaaccataccttcaaaatactccaccatcacagaagaaaatctcaag
aaatttaaccagcaaagagacaagtcattggttaataatttaaatgctagaattaaaggc
tttgtgaaatcttcatgtgagactgttttccaagacattgacaatgttgacaagaaccag
actatgaaagaagatgaaatattgaaggatcctcatcatttttccacacttcacaaatca
aggaatcttgatgttgatttaacaaatgacaaaagtcctaaaactacaagtaatacttct
gaccataataataataataataataatgataataatgacaatgacctatcaaataagtca
tcggcatctagtaacttatctagtcctgttactgatcctacaatgaggaaaaaatcacca
gaaaatacaaatcaacaacagaaagttgctagtccagagaaaatggcacaatcaacagaa
ggggaccaactagtgaaccccaaaactgcccataatagttctaagttccaaaccaattcg
aaacaccaatcaaaaacaaaacgcaatattccaaaaggatccctctcttatttctctgct
caaccaccaaaggaagcacatagaaaatctgaaggtagccgaagcccaagttttaaacta
tttgaacagactccacctcatcaagcacgacacaaggcaaaaagaaattacagatcaaat
aaacaagcaaatttatctaagctttatgacccttacgattttgacaatatcagtaatagc
tcttctaatgttaaacagtctatcagaagtttatctccagtcatttcagaaaaacgtaaa
tttttcaagactaggcagaatactaaagcaagcaatttttcaaactacttagatatcacc
aaaagatcaaaaccaattaaagaatctgaaagttttctgccatctactgcttccaagaaa
accaaacaatctttaaacaaaaagcatgaaacttcaaatcagacatctaaatctgttact
ttaaatcaaacattaaaatatgttacttcaaatcagacaccaaaatctgtcttagatgaa
tttaacaaagaccagtccaatgaaacacactttaatctcttaactcctggacgtcagggt
ttaaataacaaacaacgtgatggttcggaaagaagtgacaaaacttccaagaaagtttcg
agcatctcagttaattctaagacagcagccaataatgcacgactaactcgtaagcggaaa
cctgttaattataaagaagctgatactagctctgaagatcaaattaatgatgatgagtct
gttgttagcagtaggtcagaagccagcatgccacaaaagatactgaaaacagtcacaaga
gaaggtcaatcaaaacacaagagtgtatctccagtcagttctgaacatttttccagttat
caaaaacaatctctcaactcaaaacagaaagcacaaccactctccaagcaactgaatcaa
acaaataagagagataatcaagagcagaaaaagagcaacaccaacacaaacaaaatacaa
aagatatcagtaccttctctatcaggatcccactttggtagcagtataactcaaaacagt
gagatcagttggattgctgctaaaaaaaacaatcaccaagaaaatcagatacagaaaacc
tacagtaccaagaaagacaaatcctattttggttcttatccctgtatacccaaatcattg
aaaagcaggaagaaaccagtgaaaaaagacagtaaaaaattgaagaactataaggtttta
gaaaaggaattgacatttcatgatactgaattcacatgtaatggttctctcaactgtctt
actgatgaagaacatcaagtgttgaccagaacaactacagaactgagccacagtgagagc
atcaacaaatctctagtgtcttttaatatatcagagaaattgcttccaacaaacagtgtt
ttgggagttcaccaatttcaacctagttgtagctcatcatttacagctccttcaaaagca
actgacaatcttcaggggactgttgatatatatccacgcagtgattctagcaaatgtgca
tctcttgtttcttgtgtctctcttgcatctcattcatctctcacatcaatcaacagtaag
aaaaaccaatttctcgactccccacttgaggaaagaattttgacccaagaagaacatcac
aaactgaactttcaagaaaatttctcaaattatcaagaaaactcttccgacaaaagtgag
cctaacgtttctttgtctgatcacttagacaatttttcagggtctaatctctctattacc
agtttccaaaagaattccatgcaccagcaagcccagatgtcaccaaaacagacttcattt
tggaagccatctttatgggacaatttcactcaagacaagagtacaaagattaacaacttt
caagccttgccaacaaagacatataagaaatcagtgaccgtgtcagtcagtgatgaatct
gtagaagttcttactgcaaaagtgtcagagaggagtagtcatcaatattcctgtaccaga
gaatcagcctacttaccaactgagagtaaaagttccgacaattgtagcaattacaaatct
ggtaacatcaaacaacttgtccattctattggaactgatatgaaaaaatctattgcaata
aaacagactaatatatctgcaatcactaaagaaactctagctaaaacagagaaggccctt
ttgaaagtatggcaaaaagattttcacagccgacatgacctgcacaaagattttgagagt
aaagtattcagagaatttgagagacttcacagagaaatactctcttctgaagaatgcaga
caaacacttatgaaaactgttgatgaacaaatagaaaactcagaaaattgtcgattctca
caaatgaaatgcctaaaacgactacagatgctgtattcacagtattacacaaccgtgtgc
actgacaatgaaatcaagaaagataaacaggttgaagtcagaaatatcctgaaaactgaa
atgactgaactgcagaaaaaatttctttttgacgctacccagcaagagatgcaacagatc
cgaagccgtctttacaaaattctcacctga
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