Octopus bimaculoides (California two-spot octopus): 106877945
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Entry
106877945 CDS
T04127
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106877945
09122 Translation
03013 Nucleocytoplasmic transport
106877945
03015 mRNA surveillance pathway
106877945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106877945
03041 Spliceosome [BR:
obi03041
]
106877945
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106877945
Spliceosome [BR:
obi03041
]
Complex C
Other components
EJC/TREX
106877945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
106877945
NCBI-ProteinID:
XP_014782512
EnsemblRapid:
LOC106877945
LinkDB
All DBs
Position
1:complement(187028576..187134102)
Genome browser
AA seq
908 aa
AA seq
DB search
MADDEEIHLDGKPVDDLRVIDLKRELDKRGLPKGGSKPQLVDRLKAQLLLEKLQSLPVDE
EETVPNSKLQNDEVAGQSEFIKQYLEQQKKLFEMQREVKKRVEEEELRRKQRESEQSFDE
SSQESSENTDRVKEVLVDRDIQQTTVDEKLSPVESKIKEQSSSVSLPNSNNNNNNSNNNN
NSTTTNNNNNNNNNNSNNKMAKKKGKVIGNENNVEKEVENKEIISEQTKKEVDDKNIDEK
KRKDRAEETCPKSDKKKRKGSWSRSLSSSSSRSQSRSSSSSSVSSHSSNRRSRSHSSRSR
SRSSSSSSRKEPDMKSSEARARSRSASSRSRSASRSRSWSNSASSRSPSRSRSRSRSPSH
SRSSSVSSSPAKKKTPTKSSEEQDKKEVNETEEIVTNVAVPSCEMKKNKRDEVISPAAAD
SDVESEPQQPKEEVAANENNEQEEGQKNQDNDTTQRTSLQLSLKLQNEESSDKCDGKATA
PAPSAVPRKRKWGTSAKPTKSTTIDISTDSLKGLIPDIKPSSIKEAILDLSHDECSFSDH
EEEKVEVKFRRTVQMKEEEEEVELVTTAREVLTDADLEVSSEVAAAAPVPIAATAAPIER
EPVTPIVVNQQAPAVVVTNKTFTSPLTVRRVSHQLSITEPEEPMAARRSPSPAHNPVSKI
VHVRNLVRPFTIGQLKELLKRTGAVVENGFWIDKIKSHCFAKYETEEQAILTRKALHGTK
WPSSNPKILRVEYATDDEVSYYRSKEEGPQDIIREIQQDVSVKTVKSAEKSVREMKKKED
IKKVREWDRGKMRRRSRSASCSQSRSRSRERKKRALSGEKREKKEKKVIEEEAPAKLLDD
LFRKTKAVPCIYWLPLTESQIADRERERRQRQLEREQRRRELEKEEEAERKKRREMEEKR
KVKYSISI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgatgaagagattcatttggatggaaaaccagttgatgacctccgggttata
gatcttaaaagagaactggacaaacgaggccttcccaagggtggcagcaaacctcaactt
gtagatagactaaaagcacaacttcttttggagaaacttcaaagtttaccagtcgatgaa
gaagaaactgttcccaattccaaactgcagaacgatgaagttgcagggcaaagcgaattt
atcaagcagtaccttgaacaacagaagaagctttttgaaatgcaacgagaagtgaaaaaa
agagttgaagaggaagaactacggcgaaaacagcgtgaaagtgaacagtcttttgatgaa
agttcccaggaatcgagtgaaaatactgatagagtaaaagaagttttagtagatagagat
atacaacaaactactgttgacgaaaaactttctcctgtcgagtctaaaattaaagaacag
tctagttctgttagtttacctaatagtaataacaacaacaataacagcaacaacaataat
aacagcaccaccaccaacaacaacaacaataataacaataataatagtaataacaaaatg
gctaagaagaaagggaaagtaattggtaatgaaaataatgtagaaaaagaagttgaaaat
aaagaaatcatttctgaacagaccaaaaaggaagtggacgacaaaaatatagacgaaaag
aaaagaaaagatcgggctgaagaaacgtgtccaaaatctgataaaaagaaaagaaaagga
agctggtcacgttctctaagctcaagttcttcaagatcgcaatctcgttccagttctagt
tcgtctgtgtcgtctcattcaagcaaccgaagatctcgttctcattcctctcggtctaga
tctcggtcgtcttcgagtagttcacggaaggaacctgacatgaagtcttcagaagctcga
gcccgatcaagatctgcatcttcgagatcccgttcagcatcccgctcccgatcatggtca
aactcggcttcatcacggtctccttcacggtctagatctcgatcccgatccccatcccat
tccagatccagctccgtttctagctcacctgcaaagaaaaagacacccacaaagtcttca
gaggaacaggataaaaaagaagtaaatgaaactgaggaaattgttactaatgtagcagtt
ccgagttgtgaaatgaaaaaaaataaacgagatgaagttatctcccctgccgctgctgat
agtgatgtagagagtgaaccccagcaaccgaaagaggaagtggcagcaaatgaaaataac
gagcaggaggagggacagaaaaaccaagataatgataccactcagcgtacatctctacag
ttgtctcttaagttgcaaaatgaagaatcgagtgataaatgtgatgggaaggctacagca
ccggctccctctgctgtaccacgtaaacgtaaatggggaaccagtgctaaacccaccaag
tcaacgacaatagatatttctacagattccttaaagggtttaattcctgacataaaacca
agttctataaaagaggctatattagatctcagccacgatgaatgttcgttctctgaccac
gaagaagaaaaagtggaagtgaagttccgaagaacagtacagatgaaagaggaagaggag
gaagttgaattggtcactactgcacgagaagtcttaactgatgctgatttggaggtttct
tctgaagttgcagctgcagcaccagtgcccattgctgcgactgctgcaccaattgagaga
gaacctgtcactccaatagttgttaaccaacaagcccccgctgtggtagtgaccaacaaa
acttttacgtccccattaactgttcgaagggtcagccatcagctgtcaattactgaaccc
gaggaaccaatggctgcacggagatctccatcacctgctcataatccagttagtaagata
gtgcatgtccgaaatttagttcgtccttttacaattggtcagttaaaggaacttttaaaa
cgaactggagcagttgtggaaaatggtttctggatagacaagattaaatcccattgtttt
gccaagtatgaaacagaagaacaagctatcctaaccagaaaagctctacatggaaccaaa
tggccatcttctaatccaaaaattttgcgagtagaatatgcaacagatgatgaggtgagt
tactatcgttccaaagaggaaggccctcaggacattatccgagaaatccagcaagatgtc
agtgttaaaacagtgaaatcggctgagaaatcagtgcgagaaatgaagaagaaagaagat
attaaaaaagtgagagaatgggatcgtggtaagatgagacggcggtcgaggtcagcgtct
tgttcacagtctcggtcaaggtccagagaaaggaaaaaacgggcactaagtggagaaaaa
agagaaaagaaagaaaagaaagtaatagaagaagaagcccctgccaaattactagatgat
ttatttaggaaaaccaaagctgttccgtgtatatactggttgccactaacagaaagtcag
attgcagatcgagaaagagaacggcgacaacggcaattagaacgagaacagaggcgaaga
gagttagagaaggaagaagaagcagaacgtaaaaagagaagagagatggaagaaaaacga
aaagtaaagtattcaatttctatataa
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