Octopus bimaculoides (California two-spot octopus): 106879533
Help
Entry
106879533 CDS
T04127
Name
(RefSeq) TBC1 domain family member 1
KO
K17902
TBC1 domain family member 4
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106879533
Membrane trafficking [BR:
obi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
106879533
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
106879533
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
106879533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF3350
PID
ER
DUF5340
Motif
Other DBs
NCBI-GeneID:
106879533
NCBI-ProteinID:
XP_052825094
EnsemblRapid:
LOC106879533
LinkDB
All DBs
Position
7:complement(21760124..21957010)
Genome browser
AA seq
1288 aa
AA seq
DB search
MSLAGKNTCYIGQQDGKRYSLEEADDEEESSPLMTSPEASSDQSGATNSPNTAANQHQHQ
HHRHHNNINNNNNNDNNNSSYSNSNNVSSTHHTHTGAKASTSTPTSTIASEMSTNNSVAS
SHATNQYHRTVFEVLYLGSATIDKRYSSPHFVMPWVVAEVKRKTDGFREIRLEVREISLR
GVQVLSTSSADSSEHAKHVRATSPNTNTTSSAIQSTAALPSLSSQECQGDSNTLQTDTKE
FIVFEHKLQGVSRFAESHQEPRCFAYLTRPQLNSDFHCHVFMAPEENQIPELFASIRKAT
KEHRDDVNDSNLFFHDVSDSSEPAKAFCEVLYLGKVQVDSCKLTSSDIDRLMHRLCPVDD
DGTPINADSRQRHASDASVRSLPASLDNTVTVTENELEQQQQQLHGVKLNGSSSNEFRAA
IDSPCSSFENIEESSNETKSNSHKSYAYPSFVEKEGNQEDSLPQNLVTDIVNRTMLFRLG
KEEISLINLDQKRVMLERKFSDISFVSQVRSFCGYSFVEEILMSVKSAFKSAYEQNKLQL
NQICTMCPLHQLQKLCQEINVLSTVCGIELLKRRVQQLPEKDAAEMHNRWKQENPQTSEE
LLEVMMMSLRYLCEQKQKEHNHISTGKSAGKLEFNIMDRRTKTSKLDSFRNKAKKSLTNS
FESLIRGRKKDEAREAFRQRSGTTDSESSWAAYSVDSSAPTTPELSPSASPMSKERKFRL
PTPPDSPKAEIRPRSSTVGAIPMSTARVTKQNFPPANLNKDNNYTLYKEDNSRRQAENAT
SPMKHMFLISGSSMAQLSPESASSSVCSSFDDQSSVMATPTRRGSWRHAIFNRVVTPTDS
TRPYSLDESPSQEAVSCRPTMDARARWRKAIQETLLLIRMNKENQNLRARQDEIQQKRQN
LDYEEITPCLKEVTKVWDSMLNNSNRKETQFDKKILIDCIKQGYLNISFTRRTFPKHPYF
RTQLGPGQLALFNLLKAYSLIDQEVGYCQGLSFIAGMLLIHMDEESAFHILKYLMFNMGL
RNQFRPSMTALQIKLYQLTRLIHDNHRDLYEHFEEHEIVPTLYAAPWFLTIFASQFPLGF
VSRVFDLIFLQGIDSIFKVALILLGDHKQLIMHCESFESIVEFLKTTLPSMGLVQMERII
NQAFEVDYSKQLHAYVVEYQVLQEEMVYTSTKERHSGNSIIHRLEGANRSLKEQNRELMD
KLQNALSQQRSLESAINNFQTNETRLRSKLQALELERAALLDRVATLEKESSNFQAQHSL
LSDTQSASSLTSSAVESTNLPVSDAEKT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggcgggtaaaaatacctgctacattgggcagcaggatgggaaaagatattct
ctggaagaagcagatgacgaagaagagtcttcacctctaatgacgagccctgaagcttcg
tcggatcaaagcggtgcaaccaatagtcccaatacagctgctaaccaacaccaacatcaa
catcaccgccatcacaacaatattaataataataacaacaacgacaataacaacagcagt
tatagtaacagtaacaatgtttctagtactcaccacacacatactggcgccaaggcctcg
acatcaacaccaacgtctacaatagcttcagagatgtctaccaataatagtgtggctagt
agtcatgccactaaccagtaccatcgaacagtttttgaggtactttacctagggtcggct
accatcgacaagcgatattcgtctccacatttcgtaatgccatgggtagtggccgaagtg
aagaggaaaaccgatggctttcgcgaaattcgtttggaagtgcgggagataagtctcagg
ggtgtacaggtcctgagtacttcttctgcagactcttccgaacatgcaaaacacgtcaga
gccactagccctaatacaaacaccacgtcttcggcaattcagtcgacagctgctctacca
tcactgtcgtctcaagaatgtcaaggtgacagcaatacgctacaaacagacaccaaagaa
tttattgtgttcgaacacaaattacaaggtgtgtcgaggtttgcagaatctcaccaggaa
ccgcgatgtttcgcttatcttacccgacctcaacttaacagtgattttcattgccatgta
ttcatggcacccgaagaaaaccagattcctgaactctttgcttcaatacgcaaagctaca
aaggagcaccgagatgatgtcaatgacagcaacctgtttttccatgatgtcagtgactcc
tcagaaccagcaaaggcgttctgcgaggtcttgtaccttggcaaggtgcaagtggacagc
tgcaagctgacctcgagtgacatagacagacttatgcacaggctgtgccctgtagatgat
gacggcacccccatcaacgccgacagccgacagagacatgccagcgatgccagtgtacga
agtcttcctgcgtcacttgacaatactgtgacagtcactgagaacgaactggagcagcaa
cagcagcagcttcatggtgtgaagttgaacggaagcagcagcaacgagttccgtgctgcc
atcgactcaccatgcagctctttcgagaacatcgaagaatcgtcaaatgagacgaaaagt
aactcgcacaagagttacgcttatccgtcgtttgtggaaaaagaaggtaaccaggaggac
agtttaccgcagaaccttgtcacagatattgtaaaccggacaatgttgttccgtctaggc
aaagaggagatttctctcatcaatttggaccaaaagagagtgatgcttgagcggaaattc
tcagacatttctttcgtctctcaggtaagatctttttgtggttattcttttgttgaagaa
attcttatgtctgtgaaatcggcattcaagtctgcctacgaacagaacaagctccagttg
aaccaaatctgtacaatgtgtccactacaccaattacaaaaattatgtcaagaaataaat
gtactaagtacagtgtgcggtattgagctacttaagaggagagttcaacagttgccagaa
aaagatgcagctgagatgcacaacagatggaagcaagaaaacccacagacaagtgaagaa
cttttggaagttatgatgatgtctttgaggtacttgtgtgagcagaaacagaaagagcac
aatcatatttctacaggaaaatctgcaggcaaactagagttcaacataatggatcgacgg
actaagacttccaaactagatagtttcaggaacaaggcaaagaaaagcctgacaaattca
tttgaaagcttaatccgtggtcgtaaaaaggatgaagcaagggaggcctttcgtcaacga
agtggaacaacggacagtgaaagtagctgggcagcttattcagtcgattcttctgctccg
acaacacctgagttgtcaccgtctgcttctccaatgtccaaggaacgcaagtttcggcta
ccaacaccgccggactctccaaaagctgagattcggcctcgcagctcaactgtgggagca
attccaatgtcaacagctagggtgacaaaacagaatttccctccagcgaaccttaacaag
gacaataattacaccctctacaaagaggacaacagcaggcggcaggcagaaaatgccaca
agtccaatgaagcacatgtttctcatctctggcagcagtatggctcagctgtcccctgag
agcgcttcgtcttcagtttgttcatcctttgatgaccaaagttccgttatggcaacaccg
acacgcagaggatcctggcgacatgccatttttaaccgagttgtcacaccaaccgacagt
acacgtccttatagcttagatgaatctccatcacaagaggcagtcagttgtcgaccaaca
atggatgcccgagctcgctggaggaaagccatacaagaaactctgcttttaattcgaatg
aataaagaaaaccaaaacctgcgagccagacaagatgagatccaacagaagagacagaat
ctcgactatgaggagataacgccatgcctgaaagaagtgaccaaagtctgggattcgatg
ctcaataattctaaccgaaaggaaactcagtttgataagaaaatcctgattgattgcatc
aaacaaggttatttgaatatatctttcacaagaaggacctttccaaagcacccttatttc
cgaacgcagctgggtccaggccaactggcactgtttaatttgttaaaagcctacagttta
attgaccaagaagttggttactgtcaaggtctcagtttcattgcaggaatgctattaata
catatggatgaagaatctgcttttcacatattgaaatacctcatgtttaatatgggacta
cgaaaccagttccgaccgagcatgacagctctgcagatcaagttgtaccaactgacacgt
ctcatccatgacaaccatagagacctttatgaacattttgaagaacatgagattgtgccg
accctttatgctgcaccatggttccttaccatatttgcttcccaatttcctttgggtttt
gtctccagagtctttgacctgatctttctgcaaggtattgattccatattcaaagtagcc
ctcattcttcttggagaccacaagcaactaatcatgcactgcgagtcatttgagagcatt
gtagaattcctgaagaccaccttgccaagtatgggtcttgtgcagatggagagaatcata
aatcaggcatttgaagtggattacagcaaacaactccatgcttacgtagttgaataccag
gtgttacaagaagaaatggtctacacttcaacgaaagagcgccacagtggcaacagcata
atccatcgtctagaaggtgcaaatcgttctttgaaagaacaaaacagggagttgatggac
aagcttcagaatgcactcagtcaacaacgtagccttgaaagtgccatcaacaacttccag
accaacgagacacgactgcgttctaagctgcaggcccttgaactagagcgagcagctctt
ttggatcgtgtggctactctagagaaagagagttcaaattttcaggctcaacattccttg
ctttcggacactcaatctgccagcagtctaacatcttcagctgtagaatccacaaattta
ccagtttctgatgctgagaaaacgtag
DBGET
integrated database retrieval system
