KEGG   Octopus bimaculoides (California two-spot octopus): 106883380
Entry
106883380         CDS       T04127                                 
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
obi  Octopus bimaculoides (California two-spot octopus)
Pathway
obi04120  Ubiquitin mediated proteolysis
obi04140  Autophagy - animal
obi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:obi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    106883380
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106883380
   04140 Autophagy - animal
    106883380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:obi04131]
    106883380
   04121 Ubiquitin system [BR:obi04121]
    106883380
Enzymes [BR:obi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106883380
Membrane trafficking [BR:obi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    106883380
Ubiquitin system [BR:obi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    106883380
SSDB
Motif
Pfam: zf-TRAF TRAF-mep_MATH zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-Nse zf-RING_2 zf-RING_5 TRAF3_RING zf-C3HC4_3 Dot_icm_IcmQ KxDL
Other DBs
NCBI-GeneID: 106883380
NCBI-ProteinID: XP_052825372
EnsemblRapid: LOC106883380
LinkDB
Position
7:43153442..43186949
AA seq 415 aa
MMSHTFDEEFELSLKNVNQRFICPICLALMSKPMQTKCGHRFCKKCIFGVIAGRDRVKCP
VDNNFFWVQSDSHVTNCQFVFINCELCGKDVLSKTFVTHKNIDCPCRSVLCELCEEEVPY
NNKLKHQVLSCELFPVGCPQCGQKDIQRKDIAQHIDQASGHCPLTLISCQYHPFGCTHMD
YRKNMSYHISHAVEYHNVLLMKFLQNLEKRLESIEQNFDSNINLSSNISNKIEQMQRAIS
MRDTVQNIFKEKYSGCLLWQIDLNSNGCVFISPSFYTANPGYRIEAQLDISGCQDSILYI
TFSLSLKEGMYDDVLVFPFSGACLVTVFDQMASNCKENYSLFIECSQLQRYNENCPGSSP
FQVCHKLMKAEDFFSPRYIKNKTVFLEVKVMQAVQSQSQVKYSLMNQKNHSYLRQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgatgtcacacacttttgatgaagagtttgaattaagtttaaagaatgtaaatcagaga
ttcatttgtcccatctgtttagctttgatgtcgaaaccaatgcagacaaaatgtggccat
cgtttctgtaagaaatgtatttttggtgttattgcgggtcgtgatcgagtaaaatgtcca
gtagacaacaatttcttttgggttcaatcagattctcatgtcaccaactgtcaatttgta
ttcataaattgtgaactgtgtggtaaagatgtcctctcaaagacgtttgtgacacacaaa
aacatagattgtccttgtagaagtgttttgtgtgaactttgtgaagaagaggtaccatat
aacaataaattgaaacatcaagtgttgagctgtgagttatttcctgttggttgtccccag
tgtggtcagaaagatatccaaagaaaggacattgctcagcacattgaccaagcatctggc
cattgtcctcttacacttatttcttgtcagtatcatccatttggctgcacacacatggac
tatcgtaaaaacatgtcttaccacatatcacatgctgttgagtatcataatgttctgttg
atgaaatttctgcaaaatcttgagaaaagactcgaatccattgaacaaaactttgactcc
aatatcaatctgtcgtcaaacatcagcaataagattgaacagatgcaacgggccattagt
atgagagatactgttcaaaacatcttcaaagagaaatattctggctgtcttttatggcag
atagacctaaactcaaacgggtgtgttttcatcagtccatcattctacacggcaaaccct
ggatacagaatagaggcacagctggatatttctggttgtcaagattccattctgtatatc
actttctccctatccttaaaggagggtatgtatgatgatgtattagtgttcccgttctct
ggagcatgtcttgtcactgtttttgaccagatggcctccaactgcaaagaaaattacagt
ctgttcattgaatgttcacaattacagcgatacaatgagaactgtcctggttcctcccca
ttccaagtctgccataaattaatgaaggctgaggatttcttcagcccacgttacataaag
aataaaactgtctttttagaagtgaaagttatgcaagctgttcaatcacaaagtcaagtg
aaatatagtctcatgaatcaaaagaatcactcctacttgaggcaataa

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