Octopus bimaculoides (California two-spot octopus): 106884303
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Entry
106884303 CDS
T04127
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B isoform X1
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106884303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106884303
03041 Spliceosome [BR:
obi03041
]
106884303
03032 DNA replication proteins [BR:
obi03032
]
106884303
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106884303
Spliceosome [BR:
obi03041
]
Complex A
U1 snRNP components
Sm proteins
106884303
U2 snRNP components
106884303
Complex B
U1 snRNP components
106884303
U4/U6.U5 tri-snRNP components
106884303
Complex C
U2 snRNP components
106884303
DNA replication proteins [BR:
obi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106884303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106884303
NCBI-ProteinID:
XP_014791100
EnsemblRapid:
LOC106884303
LinkDB
All DBs
Position
1:complement(32881937..32915654)
Genome browser
AA seq
281 aa
AA seq
DB search
MLLLPRKREMFGGDLHLLRSCSAYKLANEEAVFNRFLVGISKFHPRCCWFLINGIKMTVG
KSSKMLQHINYRVRCTLQDGRIFIGTFKAFDKHMNLILGDCDEFRKIKPKSSKQGEREEK
RVLGLVLLRGEHLVSMTVEGPPPAEEGIARVPLAGAAPGTGMGRAAGRGVPAAPGSSGAA
APGLQGPVRGVGGPSQQMMTPQARATSVAAPPQPRPGQMGAPPRMQGFLPIAPARGAAPP
GNMMMGMRGPPPMGRAAPPPPAMRGPPPGPPPGMRGPPPRP
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgttattgctaccacgaaaacgggagatgttcggcggtgatttacatttactgcgaagt
tgttctgcttataaattagccaatgaggaagcagtatttaatcgttttttagtcgggatt
tccaaatttcacccacgttgttgctggtttttaatcaacggcatcaaaatgacggtgggg
aaaagttcaaagatgctccagcacatcaattacagggtacgatgtaccctgcaagatggc
cggatttttattggtactttcaaagctttcgacaaacacatgaatttaatacttggtgat
tgtgatgaatttaggaagatcaagcccaaaagtagtaaacagggtgaaagagaagaaaaa
agagttcttggattagtattactacgaggagaacatttagtatctatgactgttgaagga
ccgccaccagctgaggagggcattgctcgtgttccattggctggtgctgcccctggtaca
ggtatgggacgtgctgctggacgtggtgttcctgcagctcctggaagttcaggtgctgct
gctcctggtttgcaaggtcctgtacgtggtgttggaggaccatcacaacagatgatgaca
ccgcaagcacgggcgacatcagtcgcagcaccacctcaaccacgacctggacagatggga
gctcctcccagaatgcaaggatttttacctatagctcctgctcggggtgctgcacctcct
ggaaatatgatgatgggaatgcgagggccacctccaatgggacgtgctgcaccacctcca
cctgctatgagaggaccaccaccaggcccaccacctggtatgagaggacctcccccacga
ccgtga
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