Ooceraea biroi (clonal raider ant): 105276022
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Entry
105276022 CDS
T05778
Name
(RefSeq) DNA repair protein complementing XP-C cells homolog isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
105276022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obo03400
]
105276022
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
105276022
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
105276022
NCBI-ProteinID:
XP_026828044
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Position
9:complement(14603384..14607333)
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AA seq
891 aa
AA seq
DB search
MSDSDDDGSDSSNDFTGITPKDELTASFFQIKPVTKSKLKVDSKSGSEESSDDDNFTSVP
ENGIELFSEVVRNLEATQRFHVNNQESEQHSSKDDAAQVKKVKTEKKRRDISDEINAVLL
QGESGAFHKDDEDTDDDVQEPEDVKRPDDYSIPKEGVKITLPGTSMIFKKKPGKKESDLA
AILRRKLKANQIIVEKTARVCWLAYGFYLNCQANDPETMATAISLMSIKDYPKKNFDLTY
LAKFTRWFRNVFTIESSHGEVIINKETLLKSIEEKKIHNYRELVILYVAILRGIGLHCRL
VVSLNPPPVKLFNELLPKANTAKKNNGTKKTAKETKPDTKKPNSKKDLTNSSAIPNSKSA
QRIANLEAKKKAAEILRSKYSYDKKRKDRLDKDKELDKEDTSVQSASTSKNVKAASTSSS
KAATTLSSKRLRSSKAHNVATKRENDIGSEGNRSKASRSKRRSRSSSSSSSSGEEKEKSS
NKSKRKRADKETVVKSRGKNVKKEEATDDEEDDNNDKLKKRQDVWVEVYVESKNSWICVN
VLDPNVDCVAEIYCVHVMFQKKASKPVLYVIAYNSERLIKDVTRRYCPRWLSVTRKQRID
EKWWTETLSYWLERETAMSRQEDELLLQKELEQPLPKTISECKGHPLYVLVRHLLKYEAL
YPPDCVPLGHLKTGEAIYSRYCVHTLCSRETWLKKARVVKPKQDPYKIVKALPKYDKLSG
MRLKDSALELFGEWQTMDYEPPEAKNGIVPRNEYGNVDLFKKCMLPKGTVHINLPGLNRI
ARKLNIDCATAVVGFNFGCMGAVPATEGFVVCAEYEDTLRDAWEAEQYEAAKRATEKREK
RIYGNWKKLIKGLLIREKLAQKYEFQEDSKQSEQSNKRPKQRKTIVKKSKT
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattccgatgacgacggttccgacagtagtaacgatttcactggtatcactccg
aaggacgagctgacagcgagcttcttccagataaaaccagtgacaaagtccaagctcaag
gtagactcaaagagtggcagtgaggagagcagcgacgacgacaatttcacgagtgttcct
gagaatggcatcgagctgttctcggaagtggtgaggaatctagaagccacgcagaggttc
catgtcaacaatcaggagtccgagcagcactcgtccaaggacgatgctgcgcaggtcaag
aaagtcaagactgaaaagaagcgtagagacatatctgatgagataaacgcggttttactg
caaggagaaagtggagctttccacaaggatgatgaagacacggatgacgatgtacaggaa
ccagaagatgttaaacggccagacgattattccatacctaaggaaggtgtaaagataact
ctgccaggcacgagtatgatcttcaagaaaaagccaggaaagaaggaatcggacctagct
gcgattctacgaaggaaactgaaggccaatcagataatagtagagaaaacggctcgggtg
tgttggctagcatatggattctacctgaactgccaagcaaatgaccctgaaacgatggca
acagcgatctcccttatgtcgataaaggattacccaaaaaagaattttgatttgacatat
ctagcaaagtttacaaggtggttcaggaatgtattcacaatagaatccagtcatggtgaa
gttatcataaataaggaaacactgttaaaaagtatagaggagaaaaagattcacaattat
agggaattagtaatattgtatgtggcaatactgagaggtattggtttacattgtcgctta
gtagtatctctcaacccaccgcctgtaaaactgttcaacgagctactgcctaaagctaac
acagctaagaaaaacaatggaactaagaaaactgccaaagaaacgaagccagatactaag
aaaccaaattcaaagaaagatctcacaaatagcagcgcgattccgaatagcaaaagtgcg
cagagaattgctaatctagaagcgaagaagaaggccgcggaaattctccgttccaagtat
tcatatgataaaaagcgtaaagacaggttagataaggataaggaattagataaggaagat
acaagcgtccaaagtgcttccacctcgaagaatgtgaaagcagcttccacaagttcaagt
aaagcagctaccactttatcctcgaaacgtttaaggtccagtaaggcacataatgtcgca
acgaaacgagagaatgatattggttcagaaggtaatcgatctaaagcgagtcgttccaaa
agacgatctcgaagcagtagctccagctcgagttcaggagaggaaaaggaaaaatcatcc
aacaaatcaaaacggaaacgtgctgacaaggagacagttgttaaatccagagggaaaaat
gtgaaaaaggaagaagcgacggatgacgaagaagatgacaataatgacaaattgaaaaag
agacaagatgtatgggtcgaagtgtatgtggaatccaaaaatagttggatatgtgtaaat
gtattagatcccaatgtagactgcgtggctgaaatatactgtgtgcatgtaatgtttcag
aaaaaagcgagtaagccagtattatacgtaatagcatataactcggagaggctaataaag
gatgtcacaagacgctattgcccgcggtggctttctgttacgcgtaaacagcgcattgac
gagaaatggtggaccgaaacgttaagttactggttggaaagagagactgccatgtccaga
caggaagatgaattgcttctgcaaaaggaattggaacagccgctgccgaaaaccattagc
gaatgcaaaggacatcccttgtacgtgctggtcaggcatttactcaaatatgaagccctg
tacccaccggattgcgtaccgctcgggcatttgaaaaccggcgaagcgatctactcgcga
tactgcgtacacacgctgtgctcgcgggaaacctggctgaagaaggctcgagtagttaag
ccgaaacaagatccctacaagatagtcaaggcactgccaaaatatgacaagctttcaggt
atgcggctgaaggactctgcgctagaactgtttggagaatggcaaaccatggactacgag
ccgccagaggctaagaacggcattgtgcctcgcaatgaatacggaaatgtggatttgttt
aagaaatgtatgcttccgaagggcacagtacacataaatcttccaggattgaatcgcatc
gcccgaaaattgaacatagattgcgcgaccgctgtggtgggtttcaatttcggttgtatg
ggcgccgtgccagccactgaaggctttgttgtatgcgccgaatacgaagacacgttacga
gacgcttgggaagcggagcaatacgaggcagctaaacgcgccaccgagaaaagggagaaa
aggatttacggcaattggaaaaagctcattaagggtttgctcattagagagaagctggca
caaaagtacgagtttcaggaagactcgaagcagtcggagcagtcgaacaaacgtccaaag
caacgaaaaaccattgtaaaaaaatccaagacgtga
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