Ooceraea biroi (clonal raider ant): 105282558
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Entry
105282558 CDS
T05778
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105282558
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
105282558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
105282558
NCBI-ProteinID:
XP_011342899
LinkDB
All DBs
Position
4:complement(7086775..7092294)
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AA seq
699 aa
AA seq
DB search
MPKRKSQALIDSDSSGSASESGSDLDNDLLSLAKKKKRKSQDDSQSNEDNGAIKKDVKHD
TDTSDSDDNWNSKTGKTKKKKVPKKSKRKMTKSSTEDSASEKEPAKELSEPEEGEVSDSD
ASVSDSSQEEFNDGYDDKLMGDAEDQARLAQMTEKEREQEIFKRIEQREIMKTRFEIEKK
LRMAKKQELKKQKESKKKEKGIEERQKVDRAPDPKERSKDRKKTIEEKQDKKFHAMSLLK
ARREEKKEREEKEKQRIEQQQQQLKDIEEEELEDDHKGGGNKTKLKASDIYSDDSGSSDS
AEEEEEVAKPSSQRRSSSSESRDSDSDNDKKSVTSAKARPKKPVYISTKEDLNKIRLSRY
KMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAEISGVCETGKIYQLGGTRTNKGLK
LRHGAQERVFRLEFVSNQEFTDSEFFKWKETCALQGISTPTFDEVEQKLKDIKEALVYEF
KEEDIEKIVREKERFKQTPYNYAMKKAQLMRERDAANCRGDDETASRLNQELSELEERAS
ELDKMRTATISSISYINDRNRKRNVEQAEKAIMEEIKANKGKKVDDPFTRRSTKPRMVYK
PEDESETITATPVSDKSNAHPAGDSMSTANDKENGQESKKKQSTEDLFDAHDFDITIDLE
VPIPNNPVSVLPKPINNIKDTGPRRSLNLEDYKKKRGLI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaggaagagtcaagcattgatagactccgatagcagcgggagtgcgtcagaa
agcggttcagacttggacaatgacctattgtcattggcaaagaaaaagaaacgaaagtct
caagatgattctcagtcgaatgaagataacggagccattaaaaaagacgttaaacacgat
acagacacgtcagattccgacgacaattggaatagcaagactggaaaaaccaagaaaaag
aaagtgccaaaaaagagcaagcggaagatgacaaaatctagtacagaagatagtgctagt
gagaaagaaccagccaaggaactttcagagccagaagaaggtgaagtgtcagattcggat
gcgagtgtttccgattctagccaagaagaattcaacgatggttacgacgacaaactcatg
ggtgacgcagaagatcaagctagactcgctcaaatgaccgagaaggaacgggagcaagaa
atttttaaacgaatcgagcaacgtgagatcatgaaaacaagattcgaaattgaaaagaaa
ttacgaatggctaagaaacaggaattgaaaaagcaaaaggaatcgaagaagaaggagaag
ggtattgaggagagacaaaaagtagacagggcaccggaccctaaggaaagaagtaaggat
cgtaagaaaacgatagaagagaagcaggataagaagttccatgcaatgtcgctgcttaaa
gcgagacgcgaagagaagaaggaacgagaggaaaaagagaaacagaggatagagcagcaa
cagcaacagctgaaggatatagaggaagaagagctggaagatgatcataagggtggcgga
aataagacgaaacttaaagcatcagatatatattccgatgacagtggttcatcggatagt
gcggaagaggaagaggaagtagcgaaaccatcgtctcaacgtagatcatcctccagcgaa
agtcgcgactcggattctgataatgataaaaaatcggttactagtgccaaggctagaccg
aagaagccggtatacattagtactaaggaagatctaaacaagattcgattatctcgttac
aagatggagagattcgtccatttacctttcttcgacagggtagtgcagggctgcttcgtc
agaattgggatcggcaataataacggtaaacctgtctatagagtagccgagataagcggc
gtgtgcgagacggggaagatttatcagctcggcggcacgagaacgaacaagggattgaag
ttgcgccacggtgcgcaggaacgcgtgtttaggctggagttcgtctcgaaccaggagttc
acggactcggaattcttcaagtggaaagaaacgtgcgcgttgcaagggatatcgacgcct
acgtttgacgaggtggaacaaaaactgaaggatattaaggaggcgttggtatacgagttc
aaggaggaggatatagagaagatagtccgcgagaaggagagattcaaacaaacgccgtac
aattatgcaatgaagaaggctcaattgatgagggaacgcgacgcagctaactgcagggga
gatgacgagactgctagtcgtcttaaccaggaattaagcgagttggaggagcgcgcgtcg
gaactggacaagatgcgtacagcaaccatctccagtatatcgtacataaacgatcgcaac
agaaagagaaacgtggagcaggctgagaaagctataatggaagaaataaaggctaataag
ggcaagaaagtcgacgatccattcaccaggcgaagtactaaaccgaggatggtgtacaag
ccggaagatgaatctgagacaataaccgcaactccagtaagcgacaagtcgaatgcccat
ccggctggggattcgatgtcgactgctaacgataaagagaacggacaggaatctaagaag
aagcagagcacggaagacctgttcgatgcacatgatttcgatataaccattgatctggaa
gttcctattccaaacaaccctgtcagtgtcttaccgaaacctatcaacaatatcaaggac
acgggacctcgtcgatcattaaatctagaagattataaaaagaagcgtggcctcatctaa
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