Ooceraea biroi (clonal raider ant): 105285462
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Entry
105285462 CDS
T05778
Name
(RefSeq) uncharacterized protein LOC105285462
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105285462
04121 Ubiquitin system [BR:
obo04121
]
105285462
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105285462
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105285462
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105285462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
SGL
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
SchA_CurD
Motif
Other DBs
NCBI-GeneID:
105285462
NCBI-ProteinID:
XP_019889213
LinkDB
All DBs
Position
1:complement(6991269..7032087)
Genome browser
AA seq
1944 aa
AA seq
DB search
MGMEQFEQLLTCAICLDRYRNPKLLPCQHSFCMEPCMDGLVDYVRRQVKCPECRAEHRIP
YQGVQAFPTNVTLQRFLELHIEITGELPDPTSGQTMERCGVCSEKSYCSLCVHCEKKCCP
ECKDAHMDILRREIARINSQVRRGLHRLQDALALVEKNTLGLQTNCASVAEEVDEIYRRL
SKALKDRTEHLRNEVDRYLGTELRGLIQLKENLELEIANIQSNCDLAEAHINENVPWDDT
ELLDTKELFLRTVEFIRNFEYEAGDYSRRVRFVMAHDPNQLVLHVAGYGELNIKPESGSG
GLLGSSSSLAPPGGSPGLMRSKSDHRLASQYRQQEEERLARNRYVPEYEYDAPEYEVPRN
KSRYRSRFMRHRDGDDSDGDSRSTVRFTAPQETSGLRERVLDTEDAARGPLSGIFRLTDS
PRVMKKLQECERAGKRKKEEPASQPVQQPQPPKPQVQVRKVPTAMARQTSEDDEISRIKK
QNKNAAATATAAAAHPETVEERQPTSTPAPVHPPSSGRELPEREPEEQPLRRPAIVRRTS
ETHAPPAARSASSDSSTGSESSTGSGIRSTGAPFTAEEMKQKYLSRAPPTSTTTTVPPSS
TVTPTTGKESPNTTPAPRAPFQSRFLGAGNRRGRAAPPPPIQPPREEPPAKKKEEEEDED
EETSSSSEETESDTEEESETDVHPTANTATSAASVASQDRQRNESAMARTDIGPLLARSA
EARRGSKEDSPSTRYSSPRGSPAQSATTTTTTVTTTPSSAAMTTTTTSTPGGYTSRFVAH
VAHGQTTAHDEATSNSSNPLDRDRFRAFSADGTGDRYSAGARVVADKVIATATTAMFADY
AFDGDADDGDAVKSQPTYASSATRTDVIMDTDKSTTSSTSLHLAISKPSESLLEGSRDDT
RVTRASSSVAPSEDEGAFAEGPSGNDEISSVVTDHGQNGFARATSNDSRTTQHDEIATGN
RESEDTPGILQIVVEDVDAIADAEQPVSDIASRSVAMIERRDRSRSKDSQSVSECSSFVS
GQTASDSESGSDSESGSEEEDEEEDDESRDENCNVKERKEEKKENENSDSEDGAGSDANE
ESESSSSSESDEEATVLSASSNTRGENSVTPDDRYERELKRRSASIIDERSVEEMFDDNG
WVITEQDLQQDLQTDLQTVSTIPPGFRSTNDSADSADCPLELTKVSPVDTTDLEDASGTR
TEEIISRNGDQSRDEVSSSLESSSARSTGTVDDVERTIPMSERRASETLPRSRVYRQSSL
GKNGWLVSDESESESERTTSPIEASSDRDGDAGNRSTHANDAWRIDTIEDSTMGSIDENG
WVILNSDGDDVRNDRVGDRSAQENTIQTTGHVTKTNIENGTLVANVTRSKGTEQSGSDED
EETPGTDISIPMQMDVSRISGKKCGASVAADDCTRPWSWNQIISVAISFLNKSRSQAAMM
ASRERERERERERERERERERERERERERERDMDADIDSSLSARSRYAALKERRQRLARS
RSSHNFGGDDLDLDEEPPSPTTQSPNAYLAAKYGAGSELARSRSTHALKSREPSPERDRP
GAEKDGAALSSWARYLKNKYGNRTTKDKEPPSSSSTIPSSSSSATARRLSLGLPLRHTGQ
TSFESSDDDQKNPSGSPTSPTAAPVIPAAAGSSTSNGRRSHYLLKRRQLFKFGMRGSEAG
CFTWPRGLAVGPDNSIVVADSSNHRVQVFDGNGNFMKEFGTYGSGEGEFDCLAGVAVNRI
GQYIIADRYNHRIQVLDPSGRFLRAFGSQGTADGRFNYPWGITTDALGFIYVCDKENHRV
QVFQSDGTFVGKFGSCGSGRGQLEHPHYIAVSNTNRVIVSDSNNHRVQIFDVNGRVLTSF
GSEGSDDGQFKFPRGVAVDDQGYIVVADSGNNRIQIFSPEGAFLKSFGCWGSGDGEFKGL
EGVAVTSTGNIVVCDRENHRVQVF
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggagcagttcgagcagctgctaacctgcgcgatatgcctggaccgatacaga
aatccaaagctcttgccatgccagcacagcttttgcatggagccgtgcatggacggcctc
gtcgattacgtgcgtcgacaggtcaagtgtccagaatgccgtgccgaacatcgtataccg
taccaaggtgtgcaagcttttccgaccaacgtgacactgcaacgattcctggaattgcat
atcgagatcacgggggaactgccggacccgaccagcggacagaccatggaacgttgcggc
gtttgctccgagaagagctactgctccctgtgcgtgcactgtgaaaagaaatgctgcccg
gaatgcaaggacgcgcacatggatatcttgaggcgcgaaattgcgcgcatcaattcccag
gtgcgcagaggcttgcacaggttgcaggacgcgttggctctggtcgagaagaacacgctg
ggcctgcaaacaaattgcgcgtcggtcgccgaggaggtggacgagatttatcggaggctg
agcaaggccctgaaagaccgtacggaacatctgcgtaacgaggtcgatcgatacctcggc
actgagctcagaggcctgattcagctcaaagagaatctcgaattggaaatcgcgaatatc
cagagcaactgcgatttggcggaggcgcacataaacgagaacgtgccatgggacgatacc
gagctcctggacacgaaggaactcttcctgcgtacggtggaatttatcaggaatttcgaa
tatgaggcgggggattacagccgacgagtccgtttcgtgatggcgcacgatccgaatcag
cttgtccttcacgtggcaggttacggcgaattgaacattaaaccggaaagcggaagcggt
ggattgctagggagctctagcagtttagccccacccggaggctcgcccggtctcatgaga
agcaagagcgatcaccgtctcgcctcgcaatacaggcagcaggaggaggaacgactggcg
aggaatcgatacgttcccgaatacgagtacgatgcgccggaatacgaggtgcccaggaac
aagtcgagatacaggagccggtttatgcgacatcgggatggtgacgattctgacggcgat
tcgaggtcgacggtgagatttacggcaccgcaggagacgtccggtctgcgagaacgtgtc
ctggacacggaagatgccgcgcgtggtccactgtccggcatatttcgcctgactgattcg
ccgcgggtcatgaagaagttgcaggagtgcgagcgggctggcaaaaggaaaaaggaggaa
ccggcaagccaacccgtgcaacaacctcaaccacccaagccacaggtacaagtgagaaag
gtaccgactgcgatggcgaggcagaccagcgaggacgatgagatctccaggatcaagaag
cagaacaagaatgccgccgccaccgcaacggcggccgccgcccaccccgagacggtggag
gagaggcagccgacgtcgacgcccgctccggttcatccaccatcatccgggagggaactt
ccggaacgggaacccgaggagcagccacttaggagaccggctatagtcaggagaacttcg
gaaacgcacgcaccccccgcggccaggagtgcctcgtcggactcgagcaccggctccgag
agttcgacgggatcaggaatacgcagtacgggcgcgcccttcaccgccgaggagatgaag
cagaagtacttgtcgagagcaccgccgaccagcacgacaaccaccgtcccgccgagctcg
accgtgacacccacaacaggcaaggagtcgccgaacactaccccggcgcctagagcaccc
ttccagagccgttttttaggcgcaggtaaccgtcgtggtcgcgcggctccgccgcctcct
atccagccgccgcgagaggaaccgccagcgaaaaagaaggaggaagaagaggacgaggat
gaggagacgagcagttcgtctgaggaaacggagtcggataccgaagaagagtcggaaacg
gacgttcatccaacggcgaataccgctacttctgcagcttccgtcgcttctcaggatcgt
cagaggaacgaatcagccatggcgcgcactgacatcgggcctttgctcgctcgcagcgcc
gaagccagaagaggaagtaaggaagattcgccttcgaccaggtattcgtcgccgaggggg
agccccgcgcaatccgcgacgacgacgacgacgacggtgacgacgacaccgagcagcgcc
gcgatgacgacgacgacgacgtcgacgccgggcggctacaccagcaggttcgtagcgcac
gtagctcacggtcaaacgactgctcatgatgaggccacttctaattccagtaaccccctc
gaccgtgatcgttttagggcatttagcgcggacggtaccggcgacaggtactcggccggt
gctcgcgtcgtggccgataaagtaatcgcgacagctacgacggctatgttcgcggattat
gcatttgacggcgacgctgatgacggggacgcggttaaatcgcagccgacgtacgctagc
tcggcaacacgtacggacgttattatggacaccgacaaatcgaccacctcatccacctcc
ctccacctcgcgattagcaaaccctccgaaagcctcctcgagggtagtcgcgacgatact
cgggtaacgagagcgagttcgagcgtggctccgtccgaggatgaaggcgcgtttgcggaa
ggtccttccgggaatgatgaaatctcatcggtagtcaccgatcacggccagaacggattc
gctcgcgcgaccagtaatgattccagaacgacgcagcacgacgagatcgcgaccggaaat
cgtgaatccgaggatactccgggtatccttcaaatcgtcgtggaggatgtcgacgcgatt
gccgatgctgaacagcctgtgtcggatatcgcgagtcggtccgttgcgatgatcgagcgc
agggatcgatcgagatccaaggactcccagagcgtttccgagtgctcgagtttcgtcagc
ggacaaacggcgtccgacagcgaatcggggagtgattctgaaagcggctccgaggaggaa
gacgaggaggaggatgacgagtcccgggacgaaaactgcaacgtgaaggagagaaaggag
gagaagaaggaaaacgagaactcggatagtgaagacggtgcgggaagtgacgctaacgag
gagagcgagagttcctcgagttccgagagcgacgaagaggcaactgtattgagtgctagc
tccaacacccgaggcgagaacagcgtgacgcccgacgatcgttacgagagagagctgaag
cgccgaagcgcctcgataattgacgagaggagcgtcgaggagatgtttgacgacaacggc
tgggtgatcacagagcaggatctacagcaggatctacagaccgatctgcagaccgtgtcc
acgatcccaccgggcttccgatcgacgaacgattctgctgattctgctgattgtccactt
gagttgaccaaagtatctccagtcgatacgaccgatctcgaagacgccagtgggactcgt
accgaagagattatttcaagaaatggtgatcagagtcgcgacgaagtatcgagcagtctc
gaaagttcctccgcgcggtcgacgggcactgtcgacgatgtcgagaggacgatccctatg
agcgagcgacgagcatctgagactctgcccagaagtcgcgtgtacaggcagagcagtctg
ggtaagaatggatggctggtctctgatgagtccgagagcgaatctgagcggactacctcg
ccgatcgaagcttcttcggatcgagacggcgacgcgggaaacagaagcactcacgcaaac
gacgcgtggaggatcgacacgatcgaagatagcacgatgggcagcatcgacgagaacggg
tgggtgatacttaacagcgatggggacgacgtcagaaatgaccgcgtgggggatcgcagc
gcgcaggagaacacgattcaaacgaccggccacgtaacgaaaacgaatattgaaaatggc
acgttagtcgcgaacgtcacccggtcgaagggcaccgagcaatcaggatccgatgaggac
gaggaaacgcccggtaccgatatcagtataccgatgcaaatggatgtctcacgaatctct
ggtaaaaagtgcggcgcatcggtggccgccgatgattgcactcgtccgtggagctggaat
caaattatatcggtggctatttcgttcctgaacaagagcaggagccaggcggcgatgatg
gcgtcccgcgagcgggaacgtgaacgcgagcgtgaacgcgaacgcgaacgtgaacgcgaa
cgtgaacgcgagcgtgaacgggaacgcgaaagggacatggacgcggacattgactcgtcc
ttgtcggcgagatctcgctacgcggccttgaaggagcgacgccaacgtctggcccggtcc
aggagctcgcacaactttggcggcgacgacctcgacctggacgaggaaccgccgtcgccg
acgacccagtcgccgaacgcctacctggcggcgaagtacggtgccggctccgagctggcc
cgtagccgcagcactcacgccctgaagtccagggaaccgagcccggaacgcgatcgcccg
ggcgcggagaaggacggcgcggccctcagctcgtgggccaggtacctcaagaacaaatac
ggcaatcgcaccaccaaggacaaggaaccgccctcctcgtcctccacgataccttcatcc
agcagcagcgcgactgcgagaaggctatcgttgggcttgcctctacggcacaccgggcaa
acatccttcgaatcttctgacgacgaccaaaaaaacccgtcaggctcccccacgtcccct
acagcagctcccgttatacccgcggcagcaggttcctccactagcaatggtcggaggagt
cactatctgctgaagcggcggcagctgttcaagtttgggatgcgggggagcgaagccgga
tgctttacctggccgagaggcctcgcggtcggcccggacaactccatcgtcgtggccgac
agctctaaccatcgtgttcaagtattcgacggtaatgggaacttcatgaaggagttcgga
acatatggcagcggcgagggcgagttcgattgcctcgccggggtggccgtaaacaggatc
gggcagtacatcattgcggaccgttacaaccacagaatccaggtgcttgacccgtctggt
cgtttcctgcgagcattcggctcccagggcaccgccgacggtcgcttcaattatccgtgg
ggcatcaccaccgacgccctcggcttcatttacgtatgtgacaaggagaaccatcgtgta
caggtatttcaatcggatggcacgttcgtgggcaagttcggctcatgcggtagcggacgc
ggccaattagaacacccgcactacatcgcggtgagcaacaccaaccgagtgatcgtcagc
gacagcaacaaccaccgcgtgcaaatattcgacgtgaatggtcgcgtgttgacgtctttc
ggctcggagggttcggacgacggccagttcaagttcccacgaggggttgccgtggatgat
cagggctacatcgtcgtcgccgactccggtaacaaccgcatacagatcttcagcccggag
ggcgccttcctcaagtcatttggctgctggggcagcggggacggcgagtttaaagggttg
gaaggcgtcgccgtcacctccaccggcaatattgtcgtctgcgaccgcgagaatcaccgg
gtccaagtattctga
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integrated database retrieval system
