Ooceraea biroi (clonal raider ant): 105285626
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Entry
105285626 CDS
T05778
Name
(RefSeq) zinc finger CCCH domain-containing protein 18 isoform X1
KO
K13092
nuclear protein NHN1
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105285626
Spliceosome [BR:
obo03041
]
Common components
Common spliceosomal components
General mRNP proteins
105285626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
105285626
NCBI-ProteinID:
XP_011348239
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All DBs
Position
8:15209037..15215311
Genome browser
AA seq
1000 aa
AA seq
DB search
MSDSGSESTSSEGYDGSRSRVTTMDEVTSSRYSHRSSGSERPKSAASSVSSRGKTSGSPL
SALESPRSTPLSPKSQRSGILSPSEEGSPRSIRSLSKSPPLPSSTSPMSPPASPKSYHSG
NNSLDSPRSDRSSSRSPVLDNRSCLSPANDSKSLRFGDAESKGASDLEVDAQRSVDNSPK
SYSYKNSGSRQSSPKSPSSVKSLMSTRSSAKSFKSGPASPMDDQESDKHSPTHSGPRSPE
ETKNGSFHELDGEQISDGDIDDEPEPVSKSKPTPMTHGEDLSDVSDLESMDGPEGSTERN
AEIDKARERDDKQITNNEEHVEKEDKTAPVGLTEESEQLDFEADGQWKDERDEGETETLV
AKESKENTEKDSKDKDKDKARLKDSGEANDKEEGEEGEKEESELEEGELSDGDDARPEET
EPRPVCRFYNRGQCTWGVSCRFLHPGVTDKGNYTMFDMVRPMAYPPHASAPHEYRPHIDR
PNMVRPLSNYGAPAHPPKVEEAPTESAWERGLRHAKEMMRKANKRKESDMDFEEKKMNLS
LGQDELDREAGYYVRAASPEPPVERWPQREAAPRRLTAPRVTPERYVEEPEGGYYPPPSS
DYYRRVHYKDSRDYRERVSDYHAVPRGTHSASPPPPHNRDRERERDRERERERDYYEKYE
KKHKRPSREVIVERIPPTKPWREEEPPAMERGRGDEWADPWMRRKSPSTVRRNTSSRRSR
RQSYSSGSTYSSTSSSRSTSRTSYSSYDSLSRSRSPSPPSRTRSTGKSSKTTVLNSPPSN
PPAAAAAAAPQRGAMLMNPPAPSPRPPKGSISPTTGTLHRRAGLNPPAPSPVSSHRHHDK
AREQKAAMAAAAVAKIIKSRSRSRSSHSSSGSESSGSSSDSSESSYSSSSSEVRRRKGST
PPITRKDSKGIDALKLSGAKQQIKLTLKPTSNATTVKKIDRSALMAGKKRPIESPPLIDS
KASVAAAAAKAAKKASSRREELLKQLKAVEDAIARKRSKV
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctggttcggagagcacttcctcggagggttacgatggaagcagaagtcga
gtcactaccatggacgaggtaacgtcgtcacgttactcgcatcgttcctcaggatccgag
cgacccaagtccgcggccagttccgtctcctccaggggaaagacgtccggatcgccgttg
tcggccctcgagtcgccgaggtccactccgctgtcgccgaagtcacagcgatcgggaata
ctgtctcccagcgaggagggttctccaagatcgattcgtagcttatcaaaatcgccaccg
ttaccgtcatcaacgtcgccgatgtctccgcccgcgtcgcccaagtcttaccactcggga
aacaactcccttgactcgccccgatcggatcgcagctcctctcgatcgcccgtgctggac
aaccgatcgtgcctttcgcccgctaacgactccaagtccttgcgcttcggcgacgccgag
tcgaagggggcgtccgatctcgaggtggacgcgcagagatccgtcgacaactcgccgaaa
tcgtactcgtacaagaacagcggatccaggcagagttcgccgaagtcgcccagctccgtg
aagtccttgatgtcgacgaggagctcggcgaagtcgttcaaatctggcccggcgtcgccc
atggacgatcaggagtcggataagcactcaccgacgcactcgggcccacgctcgccggag
gaaacgaagaacgggtcgttccacgagctggacggtgagcagatttcggacggcgacatt
gacgacgagccggaacccgtgtccaagtcgaagcctacacctatgacccacggcgaggat
ctgtccgacgtgtcggatcttgagagcatggacggtcctgagggatccaccgaacgaaac
gcggagatagataaggctcgcgaacgggatgacaaacaaatcacgaacaatgaggagcac
gtggagaaagaggacaagacggcaccggtcggcttaacggaagagagcgagcagctggat
ttcgaagccgatggtcagtggaaagacgaacgtgacgaaggtgagaccgaaacgctagtc
gcgaaggagagtaaagagaatacagaaaaggatagtaaagataaggataaagacaaggcg
agattgaaggactcgggcgaagcgaacgacaaggaagaaggcgaggagggagaaaaagag
gaatccgagttggaagagggagaattgagcgacggagacgacgcacggccggaggagact
gaaccgagacccgtgtgtcgtttctacaatcgagggcagtgcacgtggggtgtgagctgc
cgatttttacacccgggtgtaacggacaaaggtaactacactatgttcgatatggtgagg
ccgatggcgtatccaccgcacgccagcgcgccgcacgagtacaggccgcacatcgaccgg
ccgaacatggtccgcccgttgtccaattacggtgctcccgcgcacccacccaaggtggag
gaggcgccgaccgaatctgcctgggagcgaggactgcgccacgccaaagagatgatgcgg
aaggctaacaagcgcaaagaatcggacatggatttcgaggagaagaaaatgaacctgagt
ttagggcaggacgagctggacagggaagcgggatactacgtgagagcggcgagccccgag
cctccggtcgagcgatggccgcagcgggaagccgcgccgcgtcgattgacagcgcctaga
gtcacgcctgagagatacgttgaggagcccgagggaggatactatcctccgccatcatcc
gactattacaggagagtgcactacaaggactctcgtgattatcgcgagcgcgtgtcagat
tatcatgcggtcccacgtggcacgcactcggcctccccgccgccgccgcacaatcgcgat
cgcgagagagaaagggatcgcgaacgcgaacgggagcgggactactacgagaagtacgag
aagaagcataaacggccgtcgcgggaggtcatcgtcgagcgcatcccgccgacgaaaccc
tggcgggaggaggaaccgccagccatggagagaggtcgaggtgacgaatgggcggaccca
tggatgcgacgtaaatctccgagcactgtgcgccgcaacacttcgtctcgtcggtcccgc
cggcagtcgtattcctcgggctctacgtattcttcaacgagttctagccgtagcacgagc
cgtactagctacagttcttacgattccctatccaggtctcgctcgccctcccctccctct
agaactcgttccaccggcaaaagtagtaaaactaccgtcctaaattcaccaccgtcgaac
cccccggccgctgcggcggcagctgcgcctcaacgaggcgccatgctgatgaatccccct
gctccatctcctcgtccaccgaaaggttccatctcgcctacgacgggtacgctgcatcga
cgggccggcttgaatccacccgccccgagcccggtctcctctcatcgtcatcatgataaa
gccagggagcagaaggcggccatggctgcggctgctgtggccaagatcattaagagtcgc
tccaggtctagatcgtctcacagcagttcgggatcggagagcagcggaagcagcagcgac
tccagcgagtcgagttactcgtcctcctccagtgaggtgcgtcgaaggaagggctcgacg
ccgccgataacgcgcaaagattccaaaggcatcgacgccctgaagctgagcggcgcgaag
cagcagatcaagctcacgctgaaaccgacgagcaacgccacgacggtgaaaaagatcgat
cgcagcgcgttgatggcgggtaagaagcggccgatcgaatcgccgccgctgatcgacagc
aaggcgagcgtggccgcggcggcggctaaagctgcgaagaaggcgagctcgcgtcgcgag
gagctgctgaaacagttgaaggccgtggaagacgcaatcgcgcgtaaaagatcgaaggtt
taa
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