Ooceraea biroi (clonal raider ant): 113563337
Help
Entry
113563337 CDS
T05778
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04512
ECM-receptor interaction
obo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113563337
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113563337
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obo04147
]
113563337
00536 Glycosaminoglycan binding proteins [BR:
obo00536
]
113563337
Exosome [BR:
obo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113563337
Glycosaminoglycan binding proteins [BR:
obo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113563337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
113563337
NCBI-ProteinID:
XP_026830605
LinkDB
All DBs
Position
14:complement(3772283..3780840)
Genome browser
AA seq
982 aa
AA seq
DB search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NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggctggatgtcctcgtctctcccacggtttccagagcgtcgcgccatccctgg
tgggggcgtatcagcacacttggggtgctatccaaggatatatatgccgacgaagttact
tccaccatcagtcactgtcttggcttacctcagcactacggtgtgttttgtacgcacgga
tcggttggcacacgaacacacgcatgggaagagctaacaaaaaccgacgcaagtaatcac
gcggcaatatccgccggttttcctgcggagaaaacagaaagattagcagagattgcagtg
tcgaggatagagaaaagaaagttcgcaatttgcgacgtgtcccaacgtcaagctgacgag
ggatataattatcctaggccttcacaacctctccaaccaggtggtccgagtggaggtccg
agcggaaaaccgggaggaggatttccaggtactcctggtggatatccatccggcggccca
ggggcgcctggtcccggaggaccaggtatacctggcgggcaacctggaaagcctggtggt
ggttatccatcaccaggatatccaggtgaacgtcctggcggtactcaaccaggtgcacca
agtggacctgggagatttccatcaggacaaggtccttccgaaggatatcccagggaacgt
ccctcaattccctttccgagtggtgaaccgacagggaggcctggagcgggcccaggtggt
tatccatccggcggtccaggtgcacccggagggtttccatcaggaccaggtggtggatat
cctagtggccgacctggtgggcaaggaccttccggatatccgagcgggggcccaggaaag
ccagaagggcccggctatcccagtggacgaccgggtggaggatatcccagcggacaggtt
cctggaggtcatcccggcggagtacaaaagcctggtggcccgggaagtggatatcctagt
ggagggccaggatctggatatccagggggtgctcaaagacctggtggtggtccaagtcct
caaggaccaggcgggtatcctgggccaggaggaccaagcgggtatccgggaccgggagga
ccaagcggacctcaaggtcctggaggtcagcaaggcccaggaggatatccaagtggacca
ggaacacaaagaccaggcggctatccgagtggtcccggcccgcaaggaccgggtgggtat
ccaagcggtcccggagcgcaaggaccaggaggagtttcaggcggaccaagtccgcaagga
ccaggagggtttccaggtagacctggtactcaaagaccgggtggatatccaggcggacca
ggtcctcaaggaccgggtggatatccaggtggaccaggtcctcaaggaccgggtggatat
ccaggtggaccaggtccacaaggaccaggaggtttcccaggtagaccaggcacgcaaggc
ccgggtggaccaggtggaccaggtccacaagggccgggaggttttccagctggaccgggt
gcagtaggacatggaggaggagaatattctcatgatgaggaaggaacctatgacgaaggt
gattactcagctataccaggcgagcccggtcgcgactatcccatatacagcgaagttcca
gagactagtttccgttgcgacgctcaacaattccctggttactatgccgatgtggatgcc
cagtgccaagtttttcacatatgtgccaacaacaaaacttatgattttctttgtccgaat
ggaaccatcttcaatcagcaatttttcgtttgcgtatggtggaatcagttcgactgtaat
tctgcgccaagtttgtattatttgaacgaaaatctttatgattacacaataatgggaaca
ccaggtcaaggattccctggcaccgaaggaccttcgagaccttctggaccgggtacatat
ccaagtggtccaggcggtccaggcggtccaggtggtccaagtggtccaagcggtccaggc
ggttcaggaggacttcaaggcccatcagggccaggcggatatccaggaggacctcaaggg
ccatcgagaccaggtggatatccaggtggacctcaaggcccatcagggccaggcggatat
ccgggaggacctcaaggtccatcgaaaccaggtggatatccaggtggacctcaaggccca
tcagggccaggcggatatccgggaggacctcaaggtccatcgaaaccaggtggatatcca
ggtggacctcaaggcccatcagggccaggcggatatccgggaggacctcaaggtccatcg
aaaccaggtggatatccaggtggacctcaaggcccatcagggccaggcggatatccggga
ggacctcaaggtccatcgagaccaggtggatatccaggtggacctcaaggcccatcaggg
ccaggtggatatcctggcagaccttcaggtccttctggcccaggtggctacccaggaggt
ccctcaggtccatcgggaccaactggaccgggcggctatccaagcggtcctcaaggtcca
acaggccctagtggtccaggcggttttccaggacgaccaggcgctccatccggacctgga
tatcctggtccaggaccacaaggcccatctggccgtccagggcccggatacttaggtcca
tcaggaccacaaggacctactggccctactggaccaacgacaagacctagtggccccggt
ggttatccaggaccaagtggaccatctccaggatatccaggcagacctcagggacctact
ggaccgcaaggtccaagctatccgggtacaggtacacctggtgctcctagtggacctggt
ggatatcctagcggtagaccgagtggcccatcattcccttcgccaggaaaacctggcacg
ggttcaccattcccatcgcaaggcccgtcaaaaccagatcgtgagtacttgccgccgcgg
gctgaataa
DBGET
integrated database retrieval system
