Oryza brachyantha (malo sina): 102700016
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Entry
102700016 CDS
T02995
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
obr
Oryza brachyantha (malo sina)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
102700016
NCBI-ProteinID:
XP_006646213
UniProt:
J3L2Z7
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Position
1:complement(21166491..21178535)
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AA seq
1397 aa
AA seq
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MAYLFSSPDSKSLSITTSTLFLSSLASLPNETPSTSAASPLSPVPASVPATALIPGSRFL
VDAFRHAGDYSVSYFLSHFHSDHYVGLGPSWRRGLVFCSAITARLLVSVLSVPPQLVVVV
DVGTHVNVDGWGVVAVDANHCPGAVQFLFRSSGPNAERYVHTGDFRFSQSMRTERNLLEF
IGADAVFLDTTYCNPKFTFPSQEESLDYVVNTIKRVKDERGAAGERVLYLIATYVVGKER
ILLEVARRCGCKIHVDSRKMEILTVLGIGGENGVFTEDAAATDVHVTGWNILGETWPYFR
PNFVKMNEIVVERGYNKAVGFVPTGWMYETKKEGYAVRAKDSLEIHLVPYSEHSSYDELR
DYVKFLHPKRVIPTVGLDGGKLDSKEAFALQKHFTCLVDETANKQEFLMAFHRKSRSVSL
GPEDAVTRLSQQEMEEATLLPAISPALERSDNLQEKITVEMKKDLSDFLPSWVSQDLILD
LLIKSGGDVVQAATDFFEKERDFFEQANVSNSETPKSEINLTDHGSSVDASSQQEVPLFS
QKPMDQQKKLINLNSMRMKSNPPKRERKRGSNSADKPKKKGRSIASKPSTESSGRKQSTI
TNYFVRTITTASKSDMSDEVTVDANQSNVKNGDQFTDLVESEKQSVSQLLQIIDGGISRE
SAISLLEKAKGDVNVAVDIFYSKTDSSDVDENDKNIAVKNIENDMSDKSSNKSMLCNSSE
ATPKMPNLCVQSYVTQAESVSISLPIEKYVPIEHACWTAGQSAPYLHLARTFDLVEREKG
KIKSTAMLCNMFRSLLALSPDDVLPAVYLCTNKISPDHENIELNIGGSLVVSALEEALGS
SRSKIHEMYKTYGDLGDVAQECRQNQMLLAPPRPLSICDVFSTLRKLSAISGSGSTGRRK
ALVLHLIRSCREMEMKFLVRTLVRNLRIGVMMKTILPSLAHAVVIDGKYSNSPVLSLEGI
KLQLQELSAEVAEAYNVIPNLDLLIPSLLREGTAFSASSLAMVPGTPIPPMLARITNGVT
QSLKLFHGRAFTCEYKYDGQRAQIHRSNDGSVQIFSRQMKESTSRFPDVVNMIKELCSIE
VSSFIIDTEVVGIDRKKGNKLMSFQELSSRERGSKHSSIAIQNIKVDICVFVFDIMFCNG
KRLLNCPLRERRKYINELFQEKPGHFELAQQLTVEADEAYVDNSTTLDRMNTFFKMACHS
SCEGIMLKTLDVDAGYSASKRCDSWLKVKRDYVEGLGDSLDLVPIGAWYGNGRKAGWYSP
FLMACYNPEYEEFQSVCRVMSGFSDEFYKEMKEFYSGDRILPKKPVYYKTDELPELWFSP
EQVWEIRGADLTLSPVHHAAIGLVHPSRGISVRMPRYICSRPDRSPDDCSTACDVASLFK
AQTRKMEVSSDAQDTIH
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacctcttctcctccccggactccaaatcgctctcgatcaccacctccaccctg
ttcctatcgtcgctcgcgtccctccccaacgaaaccccctctacctccgccgcgtccccg
ctctcacccgtccccgcctccgtgccggctactgcgctcatccccggctcccgcttcctc
gtcgacgccttccgccacgccggcgattactccgtctcctacttcctctcccactttcac
tccgaccactacgtcggcctcgggccctcctggcgccgtggcctcgtcttctgctccgcc
atcaccgcgcgcctcctcgtctccgtgctctctgttccgccgcaactcgtcgtcgtagtt
gatgttggtacccacgtcaacgtagatgggtggggcgtcgtcgctgtggatgctaaccat
tgtcctggtgccgttcagttcctcttccgctcatctggaccaaacgcggagaggtatgtc
cacaccggtgatttccggttttctcaatctatgaggaccgaacgtaatttgctggagttc
atcggtgctgatgctgtatttctagataccacgtattgcaatcccaaattcacatttcct
tcacaagaggagtcactggattatgttgtgaacacaatcaagcgggtgaaagatgagaga
ggagcagctggagagcgtgtgctatatttgatcgcgacctatgttgtgggcaaggagagg
attttgctggaagttgcacgacgctgtggctgtaagatccatgtggacagtaggaagatg
gagattttgactgtgttggggattggtggggagaatggagtttttactgaggatgctgca
gcaacagatgtgcatgtcactgggtggaatattttaggtgaaacatggccctatttccgg
ccaaattttgtgaagatgaatgagatcgtggtggagagaggatacaacaaggctgttgga
tttgtaccaaccggctggatgtatgagaccaagaaggaagggtatgcagttagagcgaag
gattcacttgagatccatcttgtaccttatagtgaacactcaagctatgacgagttgcgg
gactacgtgaagttcttgcacccaaaacgggtaattccaactgtgggacttgatggtgga
aagctcgatagtaaagaggcatttgctctgcagaagcattttacttgcttagtggatgag
actgcaaacaaacaggaattcctgatggcattccaccgaaaatcaagaagtgtttctctt
ggccctgaggatgcagttactagattgagccagcaagaaatggaggaggctactttgtta
cctgcaataagtccagctcttgagcgatcagataatttgcaagagaaaattacagtggaa
atgaagaaagatttgtcagatttcctaccctcatgggtcagccaggatctaatcttggac
ctgctaattaagtcaggcggtgatgttgttcaagcagcaactgatttttttgagaaagaa
agagatttctttgagcaagcaaatgtttctaatagtgaaacgcctaagtcagagataaat
ctcactgatcatggatcatctgttgatgcaagtagtcagcaagaagttcccttattttca
cagaagcccatggatcaacaaaaaaagctgattaatttgaactctatgagaatgaagtca
aatcctcctaaaagggaaagaaagaggggctctaattctgcagacaagccaaaaaagaaa
ggacggtcaattgcctcaaaaccctcaacagaatccagtgggcgcaaacagtccacaatt
acaaactattttgttagaactatcacaactgcttctaaaagcgatatgtccgatgaagta
accgtggatgcaaatcaaagcaatgtgaagaatggtgatcagtttactgatcttgtagag
tcagagaagcagagtgtaagccagcttcttcagattatagatggtggcatttcaagagaa
tctgcaatttctttacttgagaaggcaaaaggggatgtgaatgtggcagttgatatattt
tacagtaaaactgacagcagtgatgtagatgaaaatgataagaatattgccgtaaaaaac
atagaaaatgacatgtcagataaatctagtaataaaagcatgctttgcaactcttctgag
gctactccaaagatgccaaacttatgtgtacaatcttatgtaacacaagcagaatcagtc
agtatatcattgccaattgaaaagtatgtacccatcgagcatgcttgctggacagcagga
cagtctgcaccgtacttacatttggctcgcacttttgatctggttgaaagagaaaaggga
aagatcaaaagtactgccatgctttgtaacatgttccgaagtttgcttgccttatcacct
gatgatgtgctacctgctgtttatttatgtactaataaaatttctcctgaccatgaaaat
attgaactaaacattggtgggagtctggttgtatctgctctggaggaggcattaggatcg
agcagatctaaaatacatgagatgtacaaaacttacggtgatcttggtgatgttgcccaa
gaatgccgccagaatcaaatgttacttgctcctcctcgtccactttcaatttgcgatgtg
ttttccacacttcgcaagctaagtgcgatatcaggtagtgggagtactggaaggagaaag
gctcttgtcttgcatcttattcgttcttgcagagaaatggagatgaagtttcttgttaga
acactggtccgtaacttgcgtattggggttatgatgaaaacaattttaccttcacttgca
catgctgttgttattgatggaaaatattcaaatagtcctgtgctatctttggaaggcata
aaattacaactacaggaactttcagctgaagttgctgaggcatacaatgtcattcctaat
cttgatttgcttattccctctcttctgagagaaggcactgcattttcggcttcatcgtta
gcaatggtacctggcacccctatcccacctatgcttgcaagaattactaatggggtgact
caatcgctgaaattgtttcatggtagagcatttacctgtgaatacaagtatgatggtcag
cgagcccagattcaccgatcaaatgatggatctgtgcaaatattttcaaggcaaatgaag
gagtcaacctctcgatttcctgatgtagttaacatgatcaaagagctgtgcagcatagaa
gtgtccagctttataattgacactgaggttgtgggaatcgatagaaagaaaggaaacaag
ctgatgtcgttccaagagctgtcttcaagagaaagagggagcaagcactcctcaattgca
attcagaacataaaggtggacatttgtgtttttgtttttgatattatgttctgcaatgga
aaaaggctactgaattgcccacttcgggaaagaagaaagtacatcaatgagctttttcag
gagaagccaggacattttgagttagctcagcagcttactgtagaagcagatgaagcttat
gtggataattctaccactttggacagaatgaacacctttttcaaaatggcatgccattct
tcttgtgagggtattatgctgaaaacactggatgttgatgctggatactctgcgtccaag
cgctgtgattcatggttaaaggttaagcgtgactatgttgaaggcttaggtgatagcctg
gacttggttccaattggtgcatggtatggaaatggccggaaagctggatggtatagccct
ttccttatggcatgctacaaccctgaatacgaagaattccaaagtgtctgccgtgttatg
tctggtttctcagatgagttctataaagagatgaaggagttctattctggagacagaata
ctgcctaagaaacctgtctactacaaaacagatgaacttccggaattgtggttttctccg
gaacaagtttgggaaatccgaggtgcagacctcacgctatcccctgttcaccatgcggct
attggtctggtccatccgtcgcgtgggatctcagtgaggatgccgaggtacatatgctct
cgtcctgatcggagcccagatgactgtagcacggcttgtgatgttgctagcttgttcaaa
gctcagacccggaagatggaggtcagcagcgatgcccaggacacaattcactag
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