Oryza brachyantha (malo sina): 102701950
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Entry
102701950 CDS
T02995
Name
(RefSeq) homeobox-DDT domain protein RLT2-like
Organism
obr
Oryza brachyantha (malo sina)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WSD
HARE-HTH
DDT
Homeodomain
WHIM1
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
102701950
NCBI-ProteinID:
XP_040376666
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All DBs
Position
1:20574652..20590047
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AA seq
1844 aa
AA seq
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MDDGDGAAGKAPEEAEAPAAAAAPTSPPVPPAAGAAAGPVSAGSAGASGSSEKPVKRMMK
SPYQLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQMWFCHRRLKDRKPPTKRQRREE
EAAAGPLMAPPPVLPPPTLPLASGELLISGSSPYDEPPPMPPVHSRRGAGRSSAVPRLSA
PDIGRRYYEPLPVMLPPPVSSMQLTTSELRVIHSVESQLGEPLREDGPVLGVEFDPLPPG
SFGAPIVPEQPKQPVRSYDTKIYSRHDSNLLKASAFFPSVEHPFVPNSIGGKRKLMVGNP
PVHPHAGSRAVHEYQFLPEQPSDRYEGSSRSRYYDTPVEASNSRMSSHTPGSQLLHGSEE
AALGYPFQGQISGSGLLPQSGRPEVLPAVPTDYEMIQSNSNLNSVPVEGQYGISQVAGFE
NSLLPSERRAYHDEDGSRVDRKRKHNEEAKIAKEVEAHEKRIRKELEKQDMMKRKREEQM
RKEMERHDRERRKEEERLLRERQREQERFQREQRREHERMEKFMQKQSRRAEKQRQKEEL
RKEKEAARQKAANERATARRIAREYMELVEDERLELMELAAQSKGLPSMLYLDSDTLQQL
DSFRGMLSPFPPEVVRLKVPFSIKPWTVSEDNVGNLLMVWKFSITFADFLGLSSVTLDEF
IQSLHDYDSRFLGELHIALLKSIIKDIEDVSRTPSVALGVNPGGGHPQIVEGAYAWGFNI
RSWQRHLNVLTWPEILRQLALSAGLGPQLKKRDAEDVYSRDDNEGHDGKIVISTLRNGSA
AVNAAALMKERGYTNRRRSRHRLTPGTVKFAAFHVLSLEGSKGLTILEVAERIQESGLRD
LTTSKTPEASISAALSRDTKLFERTAPSTYCVKSPYRKDPADSEIVLSSAREKIRAFHNV
LSDSDAEKEADDAERDEDSECDDADDDPDGDDVNIDVGDGKDPLIGVKEQDGVPIMTAVN
STQRVEERVGTLTQPSAFTKSGKVDPNPSLDTSSDSPARETSDYHEIAPSDAEDQEIDES
NQGESWVQGLAEGDYCDLSVEERLNALVALVGIANEGNSIRAVLEERLESANALKKQMWA
EAQHDKRRTKEEFASRVQYNSNMNLKADVNQENGTESTTTPCRNVDKDNDGNAGVVNNNN
EIIDHNSNAVNTSYERNGSGQDITATADTLSVQQYAYADKTRSQLRSYIGHRAEQLFVYR
SLPLGQDRRRNRYWQCSTSASPNDPGSGRIFFESRDGYWRVLDSEEAFDSLVASLDTRGS
REAQLHSMLQRIESTFKEAIKRKNGAVVEQSAGRYLKNGAMEMIRASSRSEFGSPSSSLS
GVTSDSAMAFSDSFKIELGRNDVEKTAISKRADGFIRWMWRECNDLKLTCAMKCGKKRCS
ELIHSCNYCYQIYLIEERHCSSCHMIFKSIHNFSDHTSQCEEKRRTDHNWKMQTADHSVP
VGMRLLKLQLSTIEASIPPEAIQPFWTDGYRKSWGVKLHSTASLEEIFQMLTLLEGAIKR
DYLSSDFETTNELLNINTQDTASQNHVGLSGSGASLPWLPATTAAIALRTLDLDSAVSYI
QNQKMERDGGDFMKAPSRFAVVKNAQELEPLEATGFDLYDGRLAAGSGRRGRGRGSRGGG
SRGGRGRSRGGRVPRGISSSSRIGFKDENESSRKNARRGRTTRGRRRGRRTVRPRQPSEG
RGRSIPKENLLGSFSMLSNAKPATVEESPRSSGADEWGLENRRPYIEGDENSSGSQLDQS
EDNEENSQPMDEEYDEQVPNFSRGYSSGSRPHGMIDDESEEEDEDAEGDDDGEEDDVDHA
VDDVDAEMDDDDDIGDDGEDGGDGAEANADEDNGASSYSSEYSD
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggggacggcgcggcggggaaggcgccggaggaggcggaggccccggccgcc
gcggctgcgccgacgtccccgccggtgcctcccgccgcaggggccgcggcgggtcctgtg
tcagcgggcagcgcgggcgcgtctggttcttcggagaagcccgtgaagcggatgatgaag
agcccctaccagctcgaggtcctcgagaagacgtatgcagtggagcagtacccgtcggag
acgctgcgggcggagctgtccgcgaagataggcttgtcggacaggcagctgcaaatgtgg
ttctgccaccggcggctcaaggaccggaagcctcccacaaaacggcaacgaagggaggaa
gaggctgcagcggggccattgatggcacctccaccagtgttgccgcccccaacacttccg
ctggcaagcggtgagctactgatcagcggtagcagcccatatgatgagccaccgccgatg
cctcctgttcattcgcgaaggggtgcagggcggtcctcagctgtgcccaggttatctgcg
ccagatattgggcggaggtattatgagcctctgccagtaatgctaccaccaccagtatca
tcgatgcagctcacaacatctgagctccgggtgattcattccgtggagtcacaacttggg
gagccactgagggaggatgggccagtgcttggagttgaatttgatccacttcctcctggc
tccttcggcgcaccaatagttccagagcaaccaaagcagcctgtgcgatcttatgataca
aagatatattctaggcatgattcaaatctcttaaaggcctcagctttcttccccagtgtg
gaacacccatttgttccaaattcgattggtgggaagagaaagttaatggttggtaatcca
ccggttcaccctcatgctggatcacgggcagtccatgagtatcaatttcttcctgagcag
ccaagtgataggtatgagggatcaagcagatctcgttattatgacactcctgttgaagca
tcgaattcgaggatgtcatcacacaccccaggatctcagcttcttcatggatctgaggag
gcagcacttggttatcctttccaaggtcaaatatctggttctggccttttacctcaatca
ggcaggcctgaggtgcttccagctgtaccaacagattatgagatgattcagtctaatagc
aaccttaattctgttccagttgaaggccagtatggtatttctcaggttgctggatttgaa
aactcacttctaccatctgaaagaagagcctatcatgacgaagatggttctcgagtggat
agaaagcgaaaacacaacgaggaagcaaaaattgcaaaggaagttgaagctcatgaaaaa
cgaattagaaaggagcttgaaaaacaggacatgatgaagagaaagagagaggaacagatg
cgcaaggagatggagagacatgatcgtgaaagaagaaaagaagaagagagattgctgcgt
gagaggcagagagaacaagagaggttccaaagagagcaaaggcgtgaacatgagcgtatg
gagaagtttatgcagaaacagtctagacgagcagagaagcagaggcaaaaggaggagctc
cggaaggagaaagaggctgcaaggcaaaaggctgccaacgaaagagccacagcacgcaga
attgcacgggaatacatggaacttgtggaagatgagcgtttggaactaatggaattggca
gcacaaagcaaagggttgccatccatgctttatcttgacagtgacacgctgcagcagctt
gattcatttagaggcatgttgagtccatttccccctgaagtggtgagactgaaggtgcca
ttttcgataaagccttggacagtatctgaggataatgttggaaatcttttgatggtgtgg
aaattctctattacttttgctgattttcttgggctttcttcagttacacttgatgagttt
attcagtctctccatgattacgattcaaggtttttgggggaactgcacattgctctgctg
aaatccatcataaaggacattgaagatgtctcccgaactccatcagttgcattgggggtg
aatccaggaggtggtcatccacaaattgttgaaggggcatatgcttgggggttcaatata
cgaagctggcaacgccacctgaatgttcttacttggcctgaaatattacgacaattggct
ttatctgctggtttggggcctcagttaaagaaaagggacgctgaagatgtttattctcga
gatgacaatgagggtcatgatggtaagatcgtcatatccacgctccgaaatggttcagcg
gctgtgaatgctgctgctttgatgaaagaaagaggctacaccaatcgccgtagatctcgg
caccgtcttactcctggaaccgtaaaatttgctgctttccatgtgttatcccttgaagga
agtaaaggtctcacaatattagaagttgcagaaagaatccaggaatctggattgagagac
ctcacaacgagcaagacacctgaggcgtctatatctgctgccttgtcaagggatacaaaa
ctttttgagcgaactgctccttcaacatactgcgtcaagtccccttatagaaaagatcca
gctgattctgagattgtgctgtcatcagcacgagaaaagattagggcttttcataatgtg
ctttctgactctgatgctgaaaaggaggctgatgatgctgagagggatgaagattctgaa
tgtgatgatgctgatgatgatcctgatggtgatgatgtgaatattgatgtgggagatggc
aaggatcccctaattggtgttaaagaacaggatggagtaccaattatgactgcagtaaat
agcacacagagggtagaagaaagagtgggtacattaacccaaccaagtgcttttactaaa
tctggaaaagtagatcccaatccttctttagatacatctagtgattcacctgccagagag
acgtcagattatcatgaaatagctcctagtgatgctgaagatcaggagattgatgaaagc
aaccaaggtgaatcttgggtccagggattagcagaaggtgactactgtgaccttagtgtc
gaagaacggctcaatgcactggtcgcacttgttggcattgccaatgaagggaactctatt
cgagctgtgcttgaggaacgcttggaatcagcaaatgccttaaaaaagcaaatgtgggca
gaggcacaacatgataagagacgtaccaaggaagagtttgccagcagagtgcaatataat
tccaacatgaatttgaaggctgatgtaaatcaagaaaatggtactgagagtactacaact
ccatgtcgtaatgttgataaagataatgatggaaatgctggggttgtgaataataataat
gagataattgaccataacagcaatgctgttaacacatcttatgagaggaatggttcaggg
caggacataactgcaacagcagatactttgtcggttcagcagtatgcttatgctgataaa
acacgctctcagttgagatcgtacattggtcatagagcagagcagctctttgtttatagg
tcactgcccctaggacaggatcggagacgaaaccgatattggcagtgttcaacttctgca
tcaccaaatgaccctggttcaggacgaatttttttcgaatccagagatggatactggagg
gttcttgactcagaggaggcatttgattctttagtagcttcccttgatacacgtggcagc
agggaagcacagttgcattcaatgctacaaaggatcgaatcaacctttaaggaggccatt
aagaggaaaaatggtgcagttgtagaacaatcagctggaaggtatctaaagaatggagct
atggaaatgataagggcaagttctcgtagtgagtttggaagcccaagcagtagtctttct
ggtgtcacttctgatagtgccatggcattttcagattctttcaaaatagagcttgggcgt
aatgatgttgagaagactgctatttcaaaaagggcagatggctttataagatggatgtgg
agggaatgcaatgatctcaaattgacctgtgccatgaagtgtggcaagaaaagatgctct
gagttgattcattcttgtaactactgctatcagatttatttaattgaagaaaggcactgc
tcttcttgccacatgatttttaaatctattcacaatttttctgaccacacatcacaatgc
gaggagaagagaagaactgatcataactggaagatgcaaactgcagatcattctgttcct
gtaggaatgagattgctcaaattgcagttatcaaccattgaggcttctattccaccagaa
gcaatacaaccattttggactgatggttatcgaaaatcttggggtgtaaagttgcactct
acagcttccttggaggaaatattccagatgttgacactgctggaaggtgcaataaaacgg
gactacctatcttcagattttgaaacaacaaacgagttgcttaacataaacacacaagat
actgcatcccagaatcatgttggactgtctggatctggtgcttcacttccatggcttcct
gccactactgctgcaatcgcactacgaacgttagacctagactcagcagtctcatacata
caaaatcaaaagatggagagagacggtggtgatttcatgaaggctccatcaaggtttgca
gttgttaagaatgcacaagaattagagccactggaagcaactggttttgacttgtatgat
ggaaggttggctgctggtagtggccgtcggggtcgtggacgaggaagtagaggaggaggt
agcaggggaggcagaggccgaagtcgaggtgggagggtcccaagaggtattagtagctca
tctaggatcggatttaaggatgaaaatgaatcctcaaggaagaacgctcgtcgagggcgt
actactcgtggtcgcaggcgaggacgccgaactgttaggccacggcaaccatctgagggc
agaggcagatcgattcccaaggaaaatctgttggggagctttagcatgcttagcaatgca
aaacctgccactgttgaggagtctccaaggagctcaggtgctgatgagtggggcttggag
aacagaaggccgtacattgaaggtgatgagaacagttctggatctcagttagatcaatca
gaagataatgaggaaaacagccaacccatggacgaggaatatgatgagcaggttccaaat
ttttctagaggctattctagtggctccaggccccatggcatgatagatgatgaaagcgaa
gaggaggatgaagatgctgaaggtgatgatgacggggaggaagatgatgtggaccatgcg
gttgatgatgttgacgctgagatggacgacgatgatgatataggtgatgatggtgaagat
ggtggtgatggtgcagaggcgaatgctgatgaagataatggcgcttcctcgtattcatct
gagtacagcgactaa
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integrated database retrieval system
