Oryza brachyantha (malo sina): 102708265
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Entry
102708265 CDS
T02995
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13-like
KO
K16189
phytochrome-interacting factor 4
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102708265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obr03000
]
102708265
Transcription factors [BR:
obr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102708265
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GFIT
Motif
Pfam:
HLH
Tom22
Motif
Other DBs
NCBI-GeneID:
102708265
NCBI-ProteinID:
XP_015694524
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Position
7:1323531..1327501
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AA seq
398 aa
AA seq
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MDGEGARPAMTTWKRPLLPDGELVELLWQDGAVVAHAQQTHQRSSGGVVQAAGSSGVTGE
ETAVWFPDCGGGGGDTLGMDRDLYSQFWHSFANVDGHGGRGAAAALALTPPLPPARSDGV
SSRLDEAGRLSICGSNVVTTPALPADDNIDDGAPRPQPDARAGASSSGGSGSCSLFKRGR
DELDSRSEETDFEAVGETPPSKRPATKRRTRAAEVHNLSERRRRDRINERLKALQELVPH
CNKTDKASILDEAIEYLKSLQMQVQIMWMTTGIAPVMLPGAHQLMPPMGMSLNTACMPAA
QGLNQLQRATSYMNNPPPNEMPQIPSPSMNSPSVPNEMQNDNHSRVPRNPFLHRNHTLTA
TPQVQGLFPFGSQAAEQNEIQQLLSSTGIPSSSDGTVT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgagggtgcaaggccggcgatgacgacatggaagaggcccttgctcccggac
ggcgagctggtggagctgctgtggcaggacggggccgtcgtcgcgcacgcgcagcagacg
caccagcgatcgtccggcggcgtcgttcaggcggctggcagcagcggcgtcacgggcgag
gagacggccgtgtggttcccggactgcggcgggggcggcggcgacacgctgggcatggac
agggacctgtactcgcagttctggcacagcttcgccaatgtcgacgggcacgggggcagg
ggagcggctgccgcgctcgcgctcacgccgccgctgccgccggccaggagcgacggcgtg
tcgagccgtctcgacgaggccggccggctgagcatctgcggcagcaacgtggtgacgacg
ccggcgctccctgcggacgacaacatcgacgacggcgcgccgcggccgcagcccgacgcg
cgcgccggcgcgtcgtcgtcgggcgggtcggggagctgttcgctgttcaagcgggggagg
gacgagctggacagccgcagcgaggaaaccgacttcgaggccgtcggcgagaccccgccg
tcgaagaggccggcgacgaagcgccggactcgcgccgccgaggtgcacaacctgtcggag
cggagaagaagggataggatcaatgaaaggttgaaagcattgcaagaactggtgcctcat
tgcaacaagaccgacaaagcatcgatacttgatgaagcaattgagtacctgaaatccctg
caaatgcaagttcagatcatgtggatgactaccgggattgcaccggtgatgttacccggt
gctcaccagctgatgccgccgatggggatgagcttgaatacagcatgcatgcctgcggcg
caaggcctgaatcagctgcagagagcaacgagttacatgaacaatcctccgccaaacgag
atgcctcagatcccatctccatctatgaattcacccagtgttccaaacgagatgcagaat
gacaatcacagccgtgtgccacgaaatccctttcttcaccgtaatcatacactaacagca
acacctcaggtgcaaggtctatttccctttggatctcaagctgcagaacaaaatgagatt
cagcagttactctctagcactggcattccatcttcgtctgacgggaccgtaacataa
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