Oryza brachyantha (malo sina): 102708988
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Entry
102708988 CDS
T02995
Name
(RefSeq) ubiquitin C-terminal hydrolase 22
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obr01002
]
102708988
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102708988
04121 Ubiquitin system [BR:
obr04121
]
102708988
03036 Chromosome and associated proteins [BR:
obr03036
]
102708988
Enzymes [BR:
obr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102708988
Peptidases and inhibitors [BR:
obr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102708988
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102708988
Ubiquitin system [BR:
obr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102708988
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102708988
SLIK complex
102708988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
TF_Zn_Ribbon
zf-UBP_var
DUF6604
Motif
Other DBs
NCBI-GeneID:
102708988
NCBI-ProteinID:
XP_006652915
UniProt:
J3M202
LinkDB
All DBs
Position
4:complement(19612786..19616930)
Genome browser
AA seq
560 aa
AA seq
DB search
MTTPSAPPPCPHLAAYRHTTRSLRFLRRCLRVRPLGRPEIRREPRELPRCSPCSSSPSSS
SRLYACLSCATVFCPTHAASHASASTSGHQIAVDVDRAELFCAACGDQVYDPDFDHAVVI
AQSSSLPPPSASASPSPAAAPRKRRRVEYRAWAPDPAEFALMSSADPTTSASAAAPAGLR
GLNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRYLCPRQTPMRRRSAEASDKAACLAC
DLDEIYSAAFSGERTPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDDQ
HKSHAQGHGDCCIAHRVFSGILRSDVTCTHCGFTSTTFEPCMDISLDLDARYNNSLGVAS
PKLHVRNGERSSGGTNSKVSTLMRCLERFTRAERLDAEQKFFCERCKERQESLKQMSIRR
LPLVSCFHIKRFEHSSVKKMSRKVDHCLQFPFSLEMAPYLSSSILRSRFGNRIFPSEASD
VDSVSEFSSEFEIFAVITHSGKLEAGHYVTYLRLNNHWYKCDDAWVTRVEEHTVRTSQAY
MLFYVQKTLYYKACERATAV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccccgtccgcgccgccgccgtgcccgcacctcgccgcgtaccgccacaccacg
cgctcgctgcgcttcctccgccgctgcctccgcgtccgcccgctcggccgccccgagatc
cgccgcgagccgcgggagctcccccgctgctcgccctgctcctcctcgccctcctcttcc
tcccgcctctacgcctgcctctcctgcgccaccgtcttctgccccacccacgccgcctcg
cacgcctccgcctccacctcgggccaccagatcgccgtcgacgtcgaccgtgccgagctc
ttctgcgcggcctgcggggatcaggtctacgaccccgactttgaccacgccgtcgtcatc
gcccaatcctcttctctccctcccccctctgcctccgcctccccctcccctgcggctgcg
ccccgcaagcgccgccgcgtcgagtaccgcgcctgggcgccagatccggccgaattcgcg
ctcatgagctccgccgatcccaccacctccgcatccgccgccgcgcccgcggggctgcgg
gggctcaacaatctaggcaacacgtgcttcatgaactccgtgctccaggctctgctccac
gcgccgccgctccggaactacttcctcggcgatcggcacaatcgctacctctgcccgcgc
cagacgcccatgaggcgccgctcagccgaggccagcgacaaggctgcgtgcctggcgtgc
gatctcgacgagatctactccgccgccttctctggggagcgcacgccctacagccccgcc
aaattcctctatagctggtggcagcatgcatcaaaccttgcgagctacgagcaacaggat
gcacatgaattttttatctccatccttgaccatatccatgaaaatataaaggatgatcaa
cacaaatcacatgcccaaggacatggagactgttgcattgcacaccgggtattttctggc
atcttgagatcagatgtcacctgcacacattgtgggttcacatcaacaacttttgaaccc
tgtatggacatctctctggacttggatgccagatacaacaattctcttggtgttgcaagc
ccaaagttacatgtacggaatggagagcggagctccggtggcactaattccaaggtatca
acgctcatgagatgtttggagcggtttacaagggctgagaggttggatgctgaacagaag
ttcttctgtgaacgttgcaaggagaggcaagagtccctgaagcaaatgtccattcggaga
cttccattggtttcctgctttcacattaagaggtttgagcattcatctgttaagaaaatg
tcaaggaaggttgatcactgtttgcaatttcctttttctcttgaaatggcaccatatcta
tcatcctctattctcagaagcagatttgggaaccgtatatttccatcagaagctagtgat
gtagattcagtttctgaattttcatcagaatttgaaatatttgcagtgatcacacatagt
ggtaaactagaagctggccattatgtgacatatctcagattaaacaatcactggtacaaa
tgtgatgatgcctgggtaaccagagttgaggagcatactgtcagaacctctcaggcatat
atgctcttctatgtgcagaagacactttactacaaagcttgtgaaagagcaactgctgtc
tga
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