Oryza brachyantha (malo sina): 102711553
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Entry
102711553 CDS
T02995
Name
(RefSeq) histone deacetylase 6-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03082
ATP-dependent chromatin remodeling
obr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102711553
03083 Polycomb repressive complex
102711553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102711553
Enzymes [BR:
obr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102711553
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
102711553
HDAC complexes
Sin3A-HDAC complex
102711553
BRAF-HDAC complex
102711553
REST complex
102711553
SHIP complex
102711553
MiDAC complex
102711553
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
102711553
Heterochromatin formation proteins
Other heterochromatin formation proteins
102711553
Chromatin remodeling factors
NuRD complex
102711553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
102711553
NCBI-ProteinID:
XP_006659341
UniProt:
J3MSC3
LinkDB
All DBs
Position
8:9544324..9548381
Genome browser
AA seq
458 aa
AA seq
DB search
MAASGEGASLPSQGGGEDARRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGL
HRLLELSRPYPASEADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLF
PFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFH
RRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHISDIGIGEGKHYALNVP
LSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRY
LRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQP
RSVENLNTTKELENMKTMILEHLSQIEHVPSTQFHDRPSDPEAPQEEEEDMDKRPPQRSR
LWSGGAYESDTEDPDNMKTETNDLSASSVMKDESNGDS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccggcgagggcgcgtcgctgccgtcgcagggcggcggggaggacgcccgg
cggcggcgggtgagctacttctacgagccgtcgatcggcgactactactacgggcagggg
cacccgatgaagccccaccgcatccgcatggcgcactcgctggtcgtccactacggcctc
caccgcctcctcgagctctcccgcccctacccggcctccgaggccgacatccgccgcttc
cactccgacgactacgtcgccttcctcgcctccgccaccggcaacccggccctcctcgac
gcccgcgccgtcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctcttc
cccttctgccaggcctccgcggggggcagcatcggcgccgccgtcaagctcaaccgcggg
gacgccgacatcaccgtcaactgggcggggggcctccaccacgccaagaagggcgaggcc
tccgggttctgctacgtcaacgacatcgtcctcgccatcctcgagctcctcaagttccac
aggcgtgtgctatatgtagacattgatgtccaccatggagatggtgtggaggaagctttc
ttcactacaaatcgagtcatgacttgttcttttcacaagtacggggattttttccctggt
actggacatatcagtgatattggaataggcgaagggaaacattatgctttaaatgtgccc
ctgagtgatggtattgatgatgacacctttcgtgatctgttccagtgcatcattaaaaag
gtaatggaggtttatcagccagacgttgttgtactccagtgtggagcagactctttggct
ggagacaggttaggttgcttcaacctgtctgtgaaaggtcatgcagactgcctccgttac
cttaggtctttcaatattcctatgatggttttaggaggtgggggttacaccatcagaaat
gttgctcgctgctggtgctatgagactgcagttgctgttggagttgaacctgataacaag
ttaccttataatgactactatgagtactttggtcctgattataatcttcatattcaacca
agaagtgtggagaacctgaatacaactaaagagttggagaacatgaagaccatgatattg
gaacatctctcacaaatagagcatgttccaagcactcagtttcatgacagaccatcagac
cctgaagctccacaggaggaagaggaggacatggacaagagaccacctcagcgcagtaga
ttatggagtggaggagcttatgagtctgatacagaggatcctgacaacatgaaaactgag
acgaatgacttatctgccagctctgtcatgaaggatgaatcaaatggtgattcctag
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integrated database retrieval system