Oryza brachyantha (malo sina): 102716141
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Entry
102716141 CDS
T02995
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obr03021
]
102716141
Transcription machinery [BR:
obr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
102716141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
LAIKA
BURAN
EF-hand_7
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
102716141
NCBI-ProteinID:
XP_040380760
LinkDB
All DBs
Position
6:complement(14837403..14847931)
Genome browser
AA seq
1365 aa
AA seq
DB search
MFPPKGSNPYGQQQAYGGGQQSYGQIPGSSGGFSASAAAAGADGSRFGARVGQGATGQYG
GPYASVYGTQQVGGLGGKGPASSIPNLPEPSKFSSGSVGSSMARPNDDYMAVRGYGQKID
QYGSDYTLERRMYGDHSANLGRRDGLTDLDRRYPEHISGGHQIHDRMEQGSSMRHPQLLK
AQLQSGSDIRQADYFAGRSAPIHQGSQDIGAYGRVEADHRNLSILGTAPYGGQQSASLLG
GAPRANIDSLSYGQGSSSSGYGMGLPPGRDYASGKGLLHPSSDSDYRDSILSRVHPGISM
VDERAVDRVGYRREMDLRDEERRRDLILEREKERERERERELRDLRDRERERERERDRER
LRERERERELERERERLRERRMKERERDRKHPADSRREHTPPRTPADRRRSSSVRADKPL
RRLSPRRDAVHRHRSPVKEIKREYICKVLPFRLVDTERDYLSLTKRYPRLAIAPDFSKIV
LNWTKESLNLSLHTPVSLEHGIHEVDDSTDEGAVISSGKTSSTKIPEIIWNAKVLLMSGM
SNSAFADITSLRSTDERVVHLNNILKFAVFKRDRSLFAIGGPWNAAIDGGDPVVDSSCLI
QTAIRHVKELVQVDLSNCNQWNRFLEIHYNRVGKDGLFSHKEITVLFVPNLSECLPPVDL
WKNNWIAYRKSRTEKEQLLVKEKSPADAIKQKQGELSQSKSTEVHQKEDAGHSATESMKV
DSDMDQQGKDGKDNLAEPDGQNIDKVEEHVEKKGGGVDHGTEDKKPMKKKVIKKVVKVIR
KKPTGETSADKSSQENKKTLAETASIAVEEQVQQKSGDTGKEAEGKKPGKKKVIRRVIKK
KVPASARDSTAPAETSKQAVEVQPEKNEGLSGAVISEAELEEGSKAPAEDISKQNKEQEL
EETGNSLTVDQKCDGDKAKQQEVMKQKDLKQDGKNGKNDKTKDDKEKKSRDQKTDSKQKS
LTDNKEKKKSDEPPKHPGFILQAKRSKDSKVRSTSLSLDGLLDYTANDLEESVFELSLFA
ETFSEMLQHKMGCIILSFLEKLYKHYVVKRNQRKRQREEDLKKEDKKASEKRLKTNDETL
SESTPSNQGESVEMIKVGKGTGHSAGQANKDVDTEMSGDPSAAAQDEPAKEGKEKMSADH
SIIPAKKLIKEGEENMNTDNSAAVHDEPGADEEMEDEEPEYEEDPEEVEIYEDDEMDEAT
AEEPVEQNEDNVNDKAKQEVTTEEDGNKNTEERESENNANVHEKSASEEDKQSPAEKSAS
GEGKQSVSDKSEKAVGKEAKTTRSQKGDSAKDEVVDKELLQAFRYFDQNKAGYLKVDDLR
CILHNLGKFLSNRDVKDLVQIALVESNSARDNRIIYTKLAKKVDL
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgccgaaggggtccaacccctatgggcagcagcaggcgtacggaggagggcag
caatcttatggccaaatccctggaagcagtggtgggttttcggcctcggccgcagcggct
ggtgctgatggtagccgatttggtgcccgtgtcgggcagggggctactgggcagtatgga
gggccttacgcttcggtgtacggcacacagcaggttggtggacttggtggcaaaggtcca
gcttctagtattcccaatctgcctgagccatccaagttctcatctggatctgtagggtcc
agcatggcaagaccaaatgatgactatatggctgtgcgtggttatggacagaagatagac
cagtatggtagtgactatacattagagagaagaatgtatggtgatcactcagctaatctt
ggcaggagagatgggcttactgatttggatagaagatatcctgaacatatttctggaggc
catcagatccatgatcgtatggagcagggttcatcaatgcgccatccacagctgttgaaa
gcccaactgcagtctggatctgatataagacaagccgattactttgcagggaggtctgcc
ccaattcatcaaggatcacaagatattggtgcgtatggaagagttgaagctgatcatcgc
aacttgtccattcttgggaccgccccatatggaggacaacagtcagcttcgttgttggga
ggagctcctagggcaaacatcgatagcctctcctatggacaagggtcatcaagcagtggt
tatgggatgggtctgcctcctggacgtgactatgcctcaggaaaaggtcttctccatcct
tcttcggattctgattaccgagatagcattttatcccgtgtacatccaggcatctccatg
gttgatgaacgtgctgttgatcgggttggctatcgtcgcgaaatggatctaagagatgag
gagcgtcgaagggacctaatactggaaagagaaaaggagcgtgaacgtgaacgagaacga
gagctgcgagacctacgagaccgtgaaagagagcgtgaaagggaaagggaccgtgaaaga
ctaagagaacgtgaaagagaaagggaacttgaacgtgaaagagaacgtcttcgtgaacgg
cgcatgaaggagagggagcgggataggaagcaccctgctgattcaaggagggagcacact
ccacctagaactcctgctgatcggcggcgttcttcttctgttagagctgacaagcctttg
cggcgactttcacctcggcgtgatgctgtgcataggcatcgttcacccgttaaagaaatt
aagagagaatatatttgcaaggttttgccatttcgcttggtggatactgagagggactat
ttatctttgacaaaaagataccctagactagcaattgctccagatttttctaagattgtc
ttgaattggactaaagaaagcctaaatctttcactacacacaccagtgagtttggagcat
ggcatccatgaagttgatgatagtactgatgaaggagcagtgatcagctctgggaaaaca
tcaagcaccaagattcccgaaatcatttggaatgcaaaggtgcttttgatgagcggcatg
agcaacagtgcctttgctgacataacctcattgagaagtacagacgaacgagtggtgcac
ctgaacaatatcttaaaatttgctgtattcaagagggatcgttcactttttgcaattggg
ggcccttggaatgcagcaatagatggtggagaccctgtggttgactcttcttgcttgatt
cagactgctatcagacatgtcaaggaactggttcaagttgacctctctaattgtaaccag
tggaatcgttttcttgagatccattacaacagggttggcaaagatggactcttcagtcac
aaagaaattactgtactttttgtgccaaatctgtcagaatgcctacctccagtggattta
tggaagaacaattggattgcatataggaaatcaaggacggaaaaggagcagctgcttgtg
aaggagaagagcccagctgatgcaatcaaacagaagcaaggggagctgagccagagtaaa
agtactgaggttcatcaaaaagaggatgctggccatagtgctactgaaagtatgaaagtt
gatagtgatatggatcagcagggcaaagatggaaaggataatcttgctgagcctgatgga
caaaatattgataaagtcgaggaacatgttgagaagaagggtgggggtgttgaccatggt
actgaggataaaaagcccatgaaaaagaaagtgattaaaaaggttgtgaaagtaattcgg
aaaaagccaaccggcgaaacttcagctgataaatcatctcaggaaaacaagaaaacttta
gcagaaactgctagtatagctgtggaagagcaggtccagcaaaagagcggggatactgga
aaagaggctgagggcaagaaacctggaaagaagaaagtaattagaagggttattaagaaa
aaggttcctgcttcagctcgtgattcaactgcccctgctgaaacaagtaagcaagctgtg
gaggttcagccagagaagaatgaaggcttgagtggtgctgtgatttcagaagctgaactt
gaagaaggttcaaaagctcctgctgaagacatctcaaaacagaacaaagaacaggaactg
gaggaaacggggaattcattgactgtcgaccagaaatgcgatggggataaagctaagcag
caagaggttatgaaacaaaaagatctaaagcaagatgggaaaaatggaaagaatgataag
acgaaggatgataaagagaaaaagagtagagatcagaagacggattcgaaacaaaagtcg
ctcactgacaataaagaaaaaaagaaatctgatgaacctcccaaacatccaggattcatt
cttcaggcaaaaaggagtaaagactctaaagtccgttcaacatccctttcattggatggc
ctccttgactatacagccaatgatctggaggagtcagtatttgagctttctttgtttgct
gagacgttcagtgaaatgcttcaacacaagatgggttgtattatattatcatttcttgag
aaattgtataagcactatgttgtgaagagaaatcaacgtaagcgccaaagagaggaggat
ctaaagaaggaagacaagaaagcatcagagaagcgactcaagacaaacgatgaaacctta
agtgaaagtacccctagtaatcaaggggaaagtgttgaaatgataaaagtgggcaagggt
acaggtcattcagctggccaagccaacaaagatgttgatacagagatgagtggagatccc
tcagcagctgcccaggatgaaccggcaaaagagggcaaggagaagatgagtgcagatcac
tcgataatccccgctaaaaaactgattaaagagggtgaggaaaacatgaacacagataat
tcagcagctgtacatgatgagcctggagctgacgaggaaatggaggacgaagagcctgaa
tatgaagaggatcctgaagaagtagaaatatatgaagatgatgagatggatgaagctact
gccgaagaacctgtagaacagaatgaagataacgtgaatgataaagccaagcaagaagta
actactgaagaggatggaaacaagaatacagaggagcgtgagtcagaaaacaatgctaat
gtgcatgaaaaatctgcttcagaagaggataaacagtccccagctgaaaaatccgcttca
ggcgagggcaagcaatctgtatcagataaaagtgaaaaggcagttggtaaggaggcaaag
acaactagatcacaaaagggagattcagcaaaagatgaggtcgttgataaggagctgctg
caggcttttaggtacttcgaccaaaacaaagctggttatttgaaggtggatgatttaagg
tgtatacttcacaacttggggaagtttttatctaacagagatgtgaaggacttagttcaa
atcgcccttgttgagagcaattctgcgagggataatcgcattatctatacaaagcttgcg
aagaaagttgacctctga
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