Oryza brachyantha (malo sina): 102717918
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Entry
102717918 CDS
T02995
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102717918
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
obr01009
]
102717918
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102717918
Protein phosphatases and associated proteins [BR:
obr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102717918
Spliceosome [BR:
obr03041
]
Common components
Common spliceosomal components
SR proteins
102717918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
102717918
NCBI-ProteinID:
XP_040382600
LinkDB
All DBs
Position
8:10865456..10871891
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AA seq
287 aa
AA seq
DB search
MSQSKEVRYTARSITPPVDRNGTSKSKSPTPVRRSTSRSPPPKRSDSRSPRRRSSSKSPR
PRRHGRSRSRSRDRSRSRSRDDDLRNPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSCHV
VLDPRTKESRGFAFVTMDTVDDARRCIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG
RRGSQRQSRSPSPYRSRRRERSRSRDRQRDRSRSRDRRRDRSRSRDRRRDRSRSRDRRRD
RSRSRDRRRDRSRSRDRRGSSPHGRDSHRRHGDRSRSPATNGNHKKD
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatccaaggaagtgaggtacactgcgcgttctattacacctcctgtggatagg
aatggcacttcaaagtcaaagtcacccactccagtgagacgcagtacttctaggtcacct
cctccaaagaggagtgactcaaggtctccaaggaggcgtagttcttcaaagtctcctcgc
cctagaagacatggcagatcaaggtcaaggtcaagggataggagtcgctccaggagccga
gatgatgatttaagaaatcctgggaataacctttatgtgactggattatccacgcgcgta
actgaggaagacctagagaaattcttcagtaaggagggaaaggttcaaagctgtcatgtt
gttcttgatcctcgcacaaaagaatcccgtgggtttgcctttgtgaccatggatactgtt
gatgatgcaagacgctgcataaagtacctgcaccgcactgtacttgaaggtcgcctggtc
actgtagagaaagctaaaagaactcgggagagaactcctactcctggaaaatattgtggc
cgcagaggctcccaaagacagtccaggagtccatcaccttaccggtctcgcaggagagag
cgatctcgctcaagggaccgtcagagggaccgctcacgctcgagggatcgccggagggac
cgttctcgctcgagggaccgccggagggaccgctctcgctcgagggaccgccgcagggac
cgctctcgctcgagggatcgtcgcagggaccgctcgcgctcaagggatcgccgtggcagc
tcgccacatggcagagattcacacagaaggcatggagaccggtccaggtcaccagctacc
aatgggaaccataaaaaggactag
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