Oryza brachyantha (malo sina): 102718816
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Entry
102718816 CDS
T02995
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obr03019
]
102718816
03041 Spliceosome [BR:
obr03041
]
102718816
03036 Chromosome and associated proteins [BR:
obr03036
]
102718816
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102718816
Messenger RNA biogenesis [BR:
obr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102718816
mRNA cycle factors
Common to processing body (P body) and stress granule
102718816
Spliceosome [BR:
obr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102718816
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102718816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102718816
NCBI-ProteinID:
XP_015691173
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All DBs
Position
3:complement(27647321..27652436)
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AA seq
630 aa
AA seq
DB search
MRSSWADSVANAEESAPATGAASAPAANHQNSRPTRSAYVPPHLRGQGPAPTAAPTAAPG
PAAVQSSASVQPSGYAAAVGGSRWAGPASGGGTGAVGGLRQGGGGGGGRGGGWNSRPGWD
RRDREPNPFADSEAEEAAEVDFESQANTGINFDAYEDIPVETSGNDVPPPVNTFAEIDLG
DALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMKSRPP
QRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERG
VEILVATPGRLMDLLERARVSLQMVNFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVR
QTMLFSATFPKEIQRMASDFLAEYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDLLH
AQKANGAHGKQALTLVFVETKRGADALENWLFTNGFPATSIHGDRSQQEREYALRSFKSG
ATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNI
SLARPLCELMQEANQEVPPWLERYSARSSYGGGGRNRRSGGGARFGGRDFRRDHRGGGGG
YGGGGGGGYGGGGYGGGGYGGGQGATSSWE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttcatgggctgattcagttgcgaacgccgaggaatcggcgcccgcgactggt
gctgcttctgcccctgctgctaatcaccagaactcgcgccccactcgcagcgcatacgta
cctcctcacctccgcggccaaggcccagccccaactgccgctccaactgcagctccagga
ccagctgctgtccagtcctcagcttctgtacagccttctggttacgcagctgctgttggt
ggctctcgctgggctggtcctgccagtggtggcggtaccggtgctgtaggtggcctgcgc
caggggggtggtggtggtggtggccgtggtggtggttggaactcccgccctgggtgggac
cgcagagaccgtgaaccaaacccctttgccgatagcgaggcagaggaagcggcagaagtt
gattttgagagtcaggccaacactggcatcaactttgatgcctatgaggacatccctgtg
gaaacaagtggcaatgatgtgcctccaccggtcaatacttttgcagagattgatttgggt
gatgccctgaatgagaacatacgaaggtgcaagtatgtgaagcctacacctgtgcagcga
tatgccattccaatctccattgcagggcgggatctcatggcctgtgctcagacaggatcc
ggaaagacagccgctttttgtttccctatcattagtgggataatgaagtcaaggccacca
cagaggccaaggggatcgaggactgcataccctcttgcattgattttatcccccactcgt
gagctatcagtccaaattcatgaagaagcaaggaaattcgcataccagactggtgttagg
gtggtggttgcgtatgggggagcgccaatacatcaacagttgagggaactggaaaggggt
gttgaaatcctagtggctactcctggtcggctgatggatctgctggagagggctagagta
tcactgcaaatggtgaattttttagctcttgatgaagctgatcgaatgcttgacatgggg
ttcgagccacaaattcgtaaaattgttgagcagatggacatgcccccacgtggtgtgagg
cagacaatgctgtttagtgccacctttccaaaagaaatacagcggatggcttcagatttc
cttgccgagtacatcttccttgctgttggaagagttggttcaagtactgatttgattgct
caaagggtagagtttgtccttgaagcagataagagaagttacctcatggatcttctccat
gcccaaaaggcaaatggtgctcatgggaagcaagcgcttactctggtctttgtggagaca
aagaggggggctgatgctttggagaactggctttttacaaatgggtttcctgctacaagt
attcatggcgatcgatcacaacaggaaagagagtatgcgcttagatctttcaagagtgga
gcaactcccatccttgttgcaacagatgtcgctgcccgtggactcgacatacctcatgtt
gcccatgtcatcaattttgacctccccaatgacatagatgactatgttcatcgtattgga
cgaacaggacgagcagggaagtctggcttggcaactgcatttttcaacgagggcaatata
tcactggcgaggccattatgtgaactaatgcaggaagcaaaccaggaggttcctccatgg
cttgagcgctactctgcccgctcttcatatggaggtggtggcagaaaccgccgatctggc
ggtggcgcccgatttggtggccgtgacttccgccgtgatcacaggggcggcggcggcggc
tatggaggtggaggtggcggtggctacggaggcggcggttatggcggtggcggatatggg
ggtggtcaaggcgcaacgagttcctgggaatga
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