Oryza brachyantha (malo sina): 102719712
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Entry
102719712 CDS
T02995
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obr03041
]
102719712
Spliceosome [BR:
obr03041
]
Complex A
Other components
Complex A specific factors
102719712
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
RRM_1
KH_1
zf-CCHC_3
zf-CCHC
PHD_4
RRM_5
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
102719712
NCBI-ProteinID:
XP_006644320
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All DBs
Position
1:complement(17017066..17020178)
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AA seq
780 aa
AA seq
DB search
MASAETLARSPSREPSSDPPRDASSSEPPRESSSEPHHNGDAGRNSSSSRRRRRSRWEQS
NDESAANSGGEGGGGAGARKRKSRWAEEEPRPIIALPDFMKDFAADLDPEVHNLNARLLE
ISRLLQSGLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLNRERQEIISQLIRRN
PAFKPPADYRPPKLQKKLYIPMKEFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGS
VKEGKLLQKRDMKPDPSENEDLHVLVEAETQEALDAAAGMVEKLLTPVDEVLNEHKRQQL
RELAALNGTIRDDEFCRTCGEPGHRQYACPNKTSTFKSEVQCKVCGDGGHPTIDCPVRGT
TGKKMDDEYQNFLNELGGSAPESVTKSSGPMLALTGSGGSGGSSGAGAASGSNPPWAAGG
GAAAAGPNGIKEYDEANLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIKDRITGQSKGYG
FVKYSDVSQANAAIAAMNGYHLEGRVIAVRVAGKPPQPAAPPGPPAMRAPPTYPPADPAA
GGYTSQPYMGAPPPPPPGSYAPVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPLYN
VQYPPPPAPIPPPGTSPSTDGAQNYPPGVTPPSSGAPTQPVPAPVYGTSGAPNAPPMYPP
PPYGYASYYPSVTPVQAPPPPPPAGADPSQSIANAPWATHSAPPPPPAGADPSQSIANAP
WAAHSAPPPPPAGADHSQSIASAPWATHNAPPPPPPSNMEQPPATYGADAEYDKFMSEMK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgccgaaaccctagcccgctccccgtcgcgggagccgtcctccgacccgccc
cgcgacgcctcctcctccgagcccccgcgggagtcctcctccgagccgcaccacaacggg
gacgcggggcgcaactcgtcctcctcgcgccgccgccggcgcagccggtgggagcagtcg
aacgacgagtcggccgcgaactccggcggggaagggggcggcggcgcgggggcgcggaag
cgcaagtcgaggtgggccgaggaggagccccgccccatcatcgcgctcccggacttcatg
aaggacttcgccgccgatctggatccggaggtgcacaacctcaacgcgcgcctcctcgag
atctcgcgcctgctgcagtcggggctccctctcgacgaccgccccgagggcgcgcgctcg
ccctcgccggaacccatctacgacaacctcggcatccgcatcaacacccgcgagtaccgc
gccagggagcgcctcaaccgggagaggcaggagatcatctcccagctcatccgccgcaac
cccgccttcaagccccccgccgattaccgcccgcccaagcttcagaagaagctctatatc
cccatgaaggagttccccgggtacaactttatcgggctcatcatcggcccccgtggcaac
acgcagaagcggatggagaaggagacaggagccaagattgtaatccgagggaagggcagt
gtcaaggaagggaagctactgcagaagagggatatgaagccggatcccagcgagaacgag
gacctccacgtgcttgtcgaggctgagacgcaggaggcgttggatgccgcggctggcatg
gtggagaagctacttaccccggtggatgaggttctgaacgagcacaagcggcagcagctg
cgtgagctcgcggcgctgaacggaacaattagggatgatgaattttgtaggacatgtggg
gagccaggtcaccggcagtatgcttgccctaacaagacttcgacgtttaagagtgaggta
cagtgcaaggtctgcggggatggtggccacccaacaattgattgtccagtcaggggcact
actgggaagaagatggatgatgagtatcagaacttccttaatgagcttggtgggagcgca
cctgagtcagtgacaaagtctagtggtccgatgttggctcttacagggagtggtgggagt
ggtggcagcagcggcgctggtgctgctagtggtagtaacccgccatgggctgcaggtggt
ggtgctgccgccgcaggaccaaatgggatcaaggagtatgatgaggccaatctgtacatt
ggctacttgccacccacgctggatgattcagggctgataggtttgttttcacaatttgga
gagattgtcatggcgaaggttatcaaagatcgcatcactgggcagagcaaaggatatggt
tttgtgaagtattcggatgtctcgcaggctaatgcagcaatagctgcgatgaatggttac
catcttgaagggagagtgatcgcagttagagttgcaggaaagccgccgcagccagctgcg
cctcctggcccaccagccatgcgagcaccaccaacatatcctcctgcagaccctgctgct
ggtggctacacctcacagccttacatgggggcaccaccaccaccacctccagggagctat
gctccagttccttgggggcaaccgccaccatatgcttcataccctccaccgccaccaggt
tctagcatgtacaatcctccacctcctgcaccaggccaagctacaccacccctgtataat
gtgcaatatccaccaccaccagctccaatccctccaccgggcacttctccgtccactgat
ggggcgcagaactaccctcctggtgtaacaccaccaagttctggtgctcctactcagcct
gtcccagctccagtatatggaacctctggtgcaccaaatgcaccacctatgtaccctcca
cctccttatggttacgcttcatattatccatcagtaacacctgttcaggcaccaccacct
ccaccacctgctggcgccgatccctctcagagcatcgcaaatgcaccctgggcaactcac
agtgcaccacctccacccccagctggtgccgatccctctcagagcatcgcaaatgcaccc
tgggcagctcacagtgcaccacctccaccaccagctggtgctgatcactcacagagcatt
gcaagtgcaccttgggccactcacaatgcgccacctccaccaccaccttccaacatggag
caacctcctgctacctatggtgctgatgcagagtacgataagtttatgtcagagatgaag
tga
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