Oryza brachyantha (malo sina): 121055174
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Entry
121055174 CDS
T02995
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obr04121
]
121055174
Enzymes [BR:
obr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121055174
Ubiquitin system [BR:
obr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
121055174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_1
zf-RING_16
RINGv
zf-RING_4
zf-RING-like
zf-Nse
PHD
Tmpp129
FANCL_C
zinc_ribbon_16
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
121055174
NCBI-ProteinID:
XP_040382952
LinkDB
All DBs
Position
8:14930160..14931902
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AA seq
415 aa
AA seq
DB search
MGLRRGTNGCVCRLVVAAVIVALVGSGAAQTQGSTTSGPGPNYFNPKSFNPSMAVVIVVL
VTAFFFLGFFSIYIRRCAGGPLGGPGEYGGGGGRVGGGFTFASAAARSRGVRGLDPAVLA
AFPTMAYADVKAHKAGKGALECAVCLSEFDDDETLRLLPRCSHAFHTDCIDAWLASHVTC
PVCRANLAYDAEALLPPPAGGVAVWTTGQDVAAAPPQQPATAAPEQVTVVVVADAEETEE
ERVRREEAAELMRIGSVKRALRSKSGRRPPQFPRSHTTGHSLAAAVPAATTADEAAERYT
LRLPDHVLREVVAAGRLRRTTSLGGGDGSTRHSGFGGARAGRSVRLGQSGRWANMSSVMR
TFSARLPAWGSVRRGEADAPAKGSAKVAGDGTTAVEQQCDGDGDGACPRPLGDHV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggggttgcggcgaggcaccaatggctgcgtctgccgcctcgtcgtcgctgctgtcatt
gtcgcgctcgtcggcagcggggcggcgcagacgcagggatcgacgacgtcggggcctggg
ccgaattacttcaaccccaagagcttcaacccgtcgatggcggtcgtgatcgtggtgctg
gttactgctttcttcttcctcgggttcttctcgatttacatccggaggtgcgccgggggg
ccgttgggtgggccgggggagtatggcggcggcggcggccgggtgggaggtgggtttacg
tttgcgtctgcggcggcgcggtcgaggggggtgagggggctggacccggcggtgctggcg
gcgttcccgaccatggcgtacgccgacgtgaaggcgcacaaggccggcaagggcgcgctc
gagtgcgctgtgtgcctcagcgagttcgacgacgacgagacgctccggctgctgcccagg
tgctcccacgcgttccacacggactgcatcgacgcgtggttggcgtcgcacgtcacgtgt
cccgtctgccgcgccaacctcgcctacgacgccgaggccctgctgccgccgcctgccgga
ggcgttgctgtgtggaccaccgggcaagatgtcgcggcggcgccgccgcagcagccggcg
acggccgcgccagagcaagtgacggtggtcgtcgtcgctgatgcagaggagacggaggag
gagagggtcaggagggaggaggcggccgagctgatgcgcatcggcagcgtgaagcgcgcg
ctgcggagcaagtccggccgtcgcccgccgcagttcccgcgctcgcacaccaccgggcac
tcgctcgccgcagccgtgcccgccgccaccacggccgacgaggccgcggagcggtacacg
ctgcggctccccgatcacgtgctccgggaggtcgtcgccgcagggaggctacgccgcacg
accagcctcggcggcggcgacgggagcacgcgccacagcggcttcggcggcgcccgcgcc
gggaggagcgtccggctcgggcagtccgggcggtgggccaacatgtcgtcggtgatgcgc
acgttctcggccaggctgccggcgtggggctccgttcggcgtggcgaggccgacgcgccg
gcgaagggcagcgccaaggtcgccggcgacggcacgacagccgtggagcagcagtgcgac
ggcgacggtgacggcgcgtgcccacgtccacttggtgaccacgtctga
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