Afipia carboxidovorans OM5 (Mississippi): OCAR_5172
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Entry
OCAR_5172 CDS
T00783
Name
(GenBank) DNA ligase
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
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GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ACI92305
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Position
1145483..1147174
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AA seq
563 aa
AA seq
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MNRFAHLLDRLAYEPGRNNKLRLITAYFREVPDPDRGWALAALTGALSFRHAKPGLIRDL
ITARTDPALFALSYDYVGDLSETVALMWPSVHASTNGDAKHSPTLTEIVTTLHTLGKTEI
PAQLASWLDELDETGRWALLKLVTGGLRIGVSARLAKTAAAALGDKDPHEIELIWPGLAP
PYLDLFAWLEGRAEKPINRDPAPFRPVMLAHAIEDSDFAGLDPADFIAEWKWDGIRVQAV
SGRKSEEHVLARLYSRSGEDITASFPDLVPSLRLPGAIDGELLVLREGRVQSFNVLQQRL
NRKSVTPKLMKDYPIHLRAYDLLAEGEDDLRDLPFIDRRARLERFIARLDDPRIDLSPQV
VFATWDDLTAARANPSDAGAGDDADAVEGVMLKRRDALYLPGRQRGQWWKWKHDPHVIDA
VLMYAQRGHGKRSSYYSDYTFGVWTVGEGGDELVPVGKAYFGFTDEELVQIDRFVRRNTV
EKFGPVRHVVHEPNKGLVLEVAFEGLARSPRHKSGVAMRFPRISRLRWDKPPGEADRLET
LKRLLKEDLASVVAEGLLGRRAG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctttgcgcacctgctcgatcgcctcgcttatgagcccggacgcaacaacaag
ctgcggttgatcacagcgtattttcgtgaggtgccggaccccgatcgcggctgggcgctg
gcggcactgaccggtgcactgtcgtttcgccacgccaagccgggcctgatccgcgacctg
atcacggcgcgcaccgatcccgcgctgttcgcactatcttacgattatgtcggcgacctc
tcggaaaccgtggcgctgatgtggccttccgttcatgcctccacgaacggcgatgcgaag
cattctccgaccctcaccgaaatcgtcaccacgttgcatacgcttggcaagaccgagatt
cccgcgcagcttgcaagctggcttgacgaactcgacgagaccggacgctgggcgctcttg
aagctcgttaccggtggcttgcgcatcggcgtctccgcgcggcttgccaagaccgcggcc
gcagcgcttggtgacaaggacccgcatgagatcgaattgatatggccaggcctcgcgccg
ccttatctcgatctgttcgcctggctggaaggtcgcgctgaaaagccgatcaatcgcgat
cctgcaccatttcgcccggtgatgctggcgcatgccatcgaggatagcgattttgcggga
ctcgatccggcagatttcatcgcggaatggaagtgggacggcatccgcgtgcaggctgtc
agtggccgcaagagcgaggagcatgtcctcgcgcggctctattcgcgtagcggtgaggac
atcacggcgagctttcccgatctcgtaccgtcgctacgcctgcccggcgcaatcgatggc
gagcttctggtgctgcgtgaggggcgggtacagagcttcaacgtgctgcagcagcggctc
aaccgcaaaagcgtgacgccgaagctgatgaaagattatccgatccatctgcgtgcttac
gatctacttgccgaaggtgaggatgacctgcgcgaccttccgtttatcgatcgtcgcgca
cggctcgagaggttcattgcgcggctggatgatccgcggatcgatctgtcgccgcaggtg
gtattcgcgacatgggatgacctcaccgccgcgcgtgccaatccatcagatgcaggcgca
ggcgacgatgcggatgccgtggaaggtgtgatgctgaagcgccgtgatgcgctctatctt
cccggccggcagagagggcagtggtggaagtggaaacatgatccgcatgtgatcgacgcc
gtgctgatgtatgcccagcgtggccacggcaaacgctcctcctattattcggattacacg
tttggggtctggactgtcggtgaaggtggcgatgagcttgtgccggtgggcaaggcatat
tttggctttaccgacgaggagcttgtgcagatcgaccgctttgtccgccgcaacacggtc
gagaaattcggccccgtgcgtcatgtggtgcatgagccgaacaagggacttgtgctggag
gtggcgtttgaagggttggcacgctcaccgcgccataaatccggcgtcgcgatgcgcttt
ccgcgcatcagccggctgcgctgggataagccgccgggcgaggctgaccggctggagacg
ttgaaacgattgttgaaggaagacctcgcgtctgtggtcgccgaagggttgcttggccga
cgtgcaggatga
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