Afipia carboxidovorans OM5 (Mississippi): OCAR_5179
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Entry
OCAR_5179 CDS
T00783
Name
(GenBank) nodulation protein NolR
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oca03000
]
OCAR_5179
Transcription factors [BR:
oca03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
OCAR_5179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
MarR_2
HTH_20
MarR
HTH_34
TrmB
HTH_24
TFIIE_alpha
HTH_27
HxlR
Fe_dep_repress
HTH_IclR
HTH_Crp_2
Rrf2
HTH_1
HTH_11
Arg_repressor
BLACT_WH
RNA_pol_Rpc34
Endonuc-MspI
Mga
HNF-1_N
HTH_10
DNA_pol3_delta_C
DUF1492
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ACI92312
LinkDB
All DBs
Position
complement(1155070..1155417)
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AA seq
115 aa
AA seq
DB search
MSTALATKARANKLRPDQLLEQQAREVSRLLNVLANENRLLIVCYLMMRNEMKVGDLVDA
LNISQSALSQHLTKLREEGLVKFRRESQTLYYKIADERVTKLVKVLKKLYCDDAI
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggctctcgccacgaaagcgcgcgcaaacaaattgcgcccggatcaactattg
gaacaacaagctcgcgaggtctcacgtctgctgaacgtgcttgcgaatgaaaatcgcctt
ctcatcgtttgttacctcatgatgaggaacgaaatgaaggtcggcgatcttgtcgatgca
ctcaacatcagccaatcggctctctcgcaacatctcaccaagctgcgtgaggaaggactg
gtgaaattcaggcgggagtcgcaaacgctgtattacaagatcgccgatgagcgggtgacc
aagctcgtcaaggtcctcaagaaactctattgcgacgatgccatatga
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