Afipia carboxidovorans OM5 (Mississippi): OCAR_6884
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Entry
OCAR_6884 CDS
T00783
Name
(GenBank) transcriptional regulator, TetR family
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oca03000
]
OCAR_6884
Transcription factors [BR:
oca03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
OCAR_6884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_29
TetR_N
TetR_C_9
TetR_C_24
TetR_C_11
TetR_C_10
Motif
Other DBs
NCBI-ProteinID:
ACI93993
LinkDB
All DBs
Position
2845102..2845788
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AA seq
228 aa
AA seq
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MARRSADPVRTREKILKYATDEFARFGFGGARTDRIAARCKLSKNMLYYYFKSKEGLFIA
VLERMYQTLRDNQRDLSIRASDPLRALEQLIRHTFHAFESNPNTILLLNEENKHRAKYIR
KSHRTREMYYPLIDTVGLVLEKGQREGVFRPGLDPTDVYLTLASMCYHVLSNQYTLEIAL
NRNFGATRVKSKWLDHIVDVISMYCMLEPVHRPSEKEKTQKNALTAAS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgccgtagcgccgaccctgtccggactcgagaaaaaatcttgaaatatgcaacc
gatgagtttgctcgttttggttttggcggtgctcggaccgaccgcatcgcggcacgatgc
aagctcagcaagaacatgctctattattacttcaagtccaaagagggccttttcatcgcc
gttctcgaacgcatgtatcaaacattacgcgataatcaaagagacctttctatcagggcg
agtgatcctctccgtgcgctggagcaactgatccgacatactttccatgcgttcgaaagc
aatcccaacaccattctccttctcaacgaagagaataagcatcgcgccaaatacatccga
aagtcacatcgtacgagggagatgtactaccctctcatcgatacggtgggtctcgttttg
gaaaaagggcaacgggaaggagttttcagacccggcctggatccgaccgacgtgtatctg
acacttgcgtcgatgtgctatcatgtcctttcaaaccaatacacgctcgagattgcgctg
aatcgcaattttggtgctactagggtaaaaagcaaatggctagatcacatcgttgatgtg
atctccatgtactgcatgctcgagccggtgcatcggcccagtgaaaaagaaaagacccag
aagaatgccttgacagcggcatcttaa
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