Oceanicola sp. D3: FHY55_20095
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Entry
FHY55_20095 CDS
T06139
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ocd03110
]
FHY55_20095 (clpB)
Chaperones and folding catalysts [BR:
ocd03110
]
Heat shock proteins
HSP100
FHY55_20095 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
RuvB_N
IstB_IS21
AAA_7
TniB
bpMoxR
TsaE
AAA_14
AAA_3
AAA_24
T2SSE
Fez1
Torsin
Motif
Other DBs
NCBI-ProteinID:
QDC11388
UniProt:
A0A5B8C093
LinkDB
All DBs
Position
complement(3994984..3997599)
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AA seq
871 aa
AA seq
DB search
MNMNEFTERSRGFIQAAQTIAMREDHQRMVPEHLLKALMDDEQGLASNLIKRAGGSPERV
VEALDAALAKQPKVSGDAGQVYLDSQTGKVLDEAAKIAKKAGDSFVPVERILTALAVVRS
GAKQALEAGAVTAQGLNGAINDIRKGRTADTASAEEGYDALKKYARDLTEAARDGKIDPI
IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGIAIRIINGDVPESLKGKTLMAL
DMGSLIAGAKYRGEFEERLKAILKEIEAAAGDIVLFIDEMHTLVGAGKADGAMDASNLLK
PALARGELHCIGATTLDEYRKHVEKDAALARRFQPVVVQEPTVEDTVSILRGIKEKYELH
HGVRVSDSALVAAAQLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDQLDRQIL
QMQIEAEALKKEDDQASKDRLEKLEKELSDVQEKSAEMTAQWQAERDKLDSARALKEQLD
HARAQLDQAKREGNLAKAGELSYGVIPGLEKQLAEAEASESDVMVEEAVRPEQIAEVVER
WTGIPTARMLEGEREKLLRMEDEIGKRVIGQRQAVQAVSNAVRRARAGLNDEARPLGSFL
FLGPTGVGKTELTKALAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEGGVL
TEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSNLGA
QALSQLPEGSDAGEAKRDVMDAVRAHFRPEFLNRLDETIIFDRLSRDDMDGIVDIQLAHL
RRRLGARGIAIELDEGAHKWLADEGYDPVFGARPLKRVIQRALQNELAEMLLAGDVADGD
TVTVSAGAEGLIIGDKVAGSNRPRPDDAVVH
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaacgagttcacggaacggtctcgcggtttcattcaggctgcgcagaccatc
gcgatgcgggaagaccatcagcggatggtgcccgagcatcttttgaaagccctgatggac
gatgagcaggggcttgcatccaaccttatcaaacgcgcgggcggctcgcctgagcgcgtg
gtcgaggcgctcgatgcggcgctggccaagcagcccaaggtttcgggcgatgcggggcag
gtctatctggatagccagacgggcaaggtgctcgacgaggccgccaagatcgccaagaag
gcgggcgacagctttgtgccggtggagcgcatcctgacggcgctggccgttgtgcgctcg
ggggccaagcaggcgctggaggctggggccgtaactgcgcagggcctcaatggcgcgatc
aacgacattcgcaaaggccgcaccgccgataccgcttcggcggaagagggctatgacgcg
ctcaagaaatacgcgcgtgacctcaccgaagccgcccgcgatggcaagattgacccgatc
atcgggcgcgacgaggaaattcgccgcgccatgcaggtgctttcccgacggaccaagaac
aacccggtgctgatcggtgagcccggcgtgggtaaaaccgccatcgccgagggcatcgcc
attcgcatcatcaacggcgatgtgcccgagagtctgaagggcaagaccctgatggcgctc
gacatggggtcgctgattgcgggcgcgaagtatcgcggtgagtttgaggagcggttgaag
gccatcctgaaagagatcgaggccgccgccggtgatattgtgctgttcatcgacgagatg
cacacgcttgtgggtgccggcaaagccgatggggcgatggacgcctccaacctgctgaag
cctgcgctcgcgcggggtgagctgcactgtattggtgccaccacgcttgatgagtatcgc
aagcatgtcgagaaagacgcggcccttgctcgccggttccagccggtggtggtgcaggag
ccgacggtggaagacacggtgtcgatcctgcggggcatcaaggagaagtatgagctgcac
cacggcgtgcgggtcagcgactcggcccttgtggccgcggcccagctttcgcaccgctac
atcactgaccgcttcttgcccgacaaggcaatcgacctcgtggatgaggcggcgagccgt
ttgcggatggaggtggatagcaagcccgaggagcttgaccagctggaccgacagatcctg
cagatgcagatcgaagccgaggcgctgaagaaggaagacgaccaagcctccaaggatcgg
ctcgaaaagctcgaaaaggagctttccgacgtgcaggagaagtctgccgagatgacggcg
caatggcaggccgagcgtgacaagctggattcggcccgtgcgctgaaagagcagctcgac
catgcccgcgcccagcttgatcaggccaagcgtgagggcaatttggcgaaagcgggtgag
ctttcctatggcgtcatcccggggctggagaagcagcttgccgaggctgaagcgtcggag
agtgacgtgatggtcgaagaggccgtgcgccccgagcagatcgccgaggttgtcgagcgg
tggacgggtattccgaccgcgcggatgctggaaggtgagcgcgagaagctgctgcgtatg
gaagacgagatcggcaagcgcgtgatcggccagcgccaggcggtgcaggcggtgtctaac
gcggtgcgccgtgcgcgggccgggctgaacgacgaggcgcgcccgttgggcagcttcctc
ttcctcgggccgaccggcgtgggcaagacggagctgaccaaggcgcttgccgagtttctc
ttcgatgatgacagcgcgatggtgcggatcgacatgagcgagttcatggagaagcacgcc
gtcgcccggctcatcggtgcccctccgggctacgttggctatgacgaaggcggcgtgctg
accgaggcggttcggcggcgtccctatcaggtggtgttgttcgacgaggtcgaaaaggcg
catccggacgtgttcaacgtgctcctgcaggtgcttgatgatggtgtgctgaccgatggt
cagggccgcactgtggacttcaagcaaacgctgatcgtgctcacctccaacctcggggcg
caggcgctcagccagttgcccgagggatcggacgccggtgaggccaagcgcgacgtgatg
gacgcggtgcgggcgcacttccgcccggaattcctcaaccgtcttgatgagaccatcatc
tttgaccggctcagccgggatgacatggatggcatcgtcgacatccagctggcccacctg
cgccgtcgccttggtgcgcggggcatagcgatcgagctggatgagggcgcgcataagtgg
ctggccgatgagggctatgatccggtgttcggggcccgcccgctgaagcgcgtgatccag
cgggccttgcagaacgagctggccgagatgctgctggccggggatgttgccgatggcgat
acggtcacggtgtctgccggggctgagggcttgatcatcggtgacaaggtggccggctcc
aaccgcccgcgccccgatgatgctgtggtgcactga
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