Afipia carboxidovorans OM5 (Goettingen): OCA5_c27960
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Entry
OCA5_c27960 CDS
T01617
Symbol
lig
Name
(GenBank) ATP-dependent DNA ligase Lig
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
AEI07489
UniProt:
B6JC89
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Position
complement(2977283..2978974)
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AA seq
563 aa
AA seq
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MNRFAHLLDRLAYEPGRNNKLRLITAYFREVPDPDRGWALAALTGALSFRHAKPGLIRDL
ITARTDPALFALSYDYVGDLSETVALMWPSVHASTNGDAKHSPTLTEIVTTLHTLGKTEI
PAQLASWLDELDETGRWALLKLVTGGLRIGVSARLAKTAAAALGDKDPHEIELIWPGLAP
PYLDLFAWLEGRAEKPINRDPAPFRPVMLAHAIEDSDFAGLDPADFIAEWKWDGIRVQAV
SGRKSEEHVLARLYSRSGEDITASFPDLVPSLRLPGAIDGELLVLREGRVQSFNVLQQRL
NRKSVTPKLMKDYPIHLRAYDLLAEGEDDLRDLPFIDRRARLERFIARLDDPRIDLSPQV
VFATWDDLTAARANPSDAGAGDDADAVEGVMLKRRDALYLPGRQRGQWWKWKHDPHVIDA
VLMYAQRGHGKRSSYYSDYTFGVWTVGEGGDELVPVGKAYFGFTDEELVQIDRFVRRNTV
EKFGPVRHVVHEPNKGLVLEVAFEGLARSPRHKSGVAMRFPRISRLRWDKPPGEADRLET
LKRLLKEDLASVVAEGLLGRRAG
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctttgcgcacctgctcgatcgcctcgcttatgagcccggacgcaacaacaag
ctgcggttgatcacagcgtattttcgtgaggtgccggaccccgatcgcggctgggcgctg
gcggcactgaccggtgcactgtcgtttcgccacgccaagccgggcctgatccgcgacctg
atcacggcgcgcaccgatcccgcgctgttcgcactatcttacgattatgtcggcgacctc
tcggaaaccgtggcgctgatgtggccttccgttcatgcctccacgaacggcgatgcgaag
cattctccgaccctcaccgaaatcgtcaccacgttgcatacgcttggcaagaccgagatt
cccgcgcagcttgcaagctggcttgacgaactcgacgagaccggacgctgggcgctcttg
aagctcgttaccggtggcttgcgcatcggcgtctccgcgcggcttgccaagaccgcggcc
gcagcgcttggtgacaaggacccgcatgagatcgaattgatatggccaggcctcgcgccg
ccttatctcgatctgttcgcctggctggaaggtcgcgctgaaaagccgatcaatcgcgat
cctgcaccatttcgcccggtgatgctggcgcatgccatcgaggatagcgattttgcggga
ctcgatccggcagatttcatcgcggaatggaagtgggacggcatccgcgtgcaggctgtc
agtggccgcaagagcgaggagcatgtcctcgcgcggctctattcgcgtagcggtgaggac
atcacggcgagctttcccgatctcgtaccgtcgctacgcctgcccggcgcaatcgatggc
gagcttctggtgctgcgtgaggggcgggtacagagcttcaacgtgctgcagcagcggctc
aaccgcaaaagcgtgacgccgaagctgatgaaagattatccgatccatctgcgtgcttac
gatctacttgccgaaggtgaggatgacctgcgcgaccttccgtttatcgatcgtcgcgca
cggctcgagaggttcattgcgcggctggatgatccgcggatcgatctgtcgccgcaggtg
gtattcgcgacatgggatgacctcaccgccgcgcgtgccaatccatcagatgcaggcgca
ggcgacgatgcggatgccgtggaaggtgtgatgctgaagcgccgtgatgcgctctatctt
cccggccggcagagagggcagtggtggaagtggaaacatgatccgcatgtgatcgacgcc
gtgctgatgtatgcccagcgtggccacggcaaacgctcctcctattattcggattacacg
tttggggtctggactgtcggtgaaggtggcgatgagcttgtgccggtgggcaaggcatat
tttggctttaccgacgaggagcttgtgcagatcgaccgctttgtccgccgcaacacggtc
gagaaattcggccccgtgcgtcatgtggtgcatgagccgaacaagggacttgtgctggag
gtggcgtttgaagggttggcacgctcaccgcgccataaatccggcgtcgcgatgcgcttt
ccgcgcatcagccggctgcgctgggataagccgccgggcgaggctgaccggctggagacg
ttgaaacgattgttgaaggaagacctcgcgtctgtggtcgccgaagggttgcttggccga
cgtgcaggatga
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