Afipia carboxidovorans OM5 (Goettingen): OCA5_pHCG300470
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Entry
OCA5_pHCG300470 CDS
T01617
Symbol
cbbL
Name
(GenBank) ribulose bisphosphate carboxylase large chain CbbL
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg00630
Glyoxylate and dicarboxylate metabolism
ocg00710
Carbon fixation in photosynthetic organisms
ocg01100
Metabolic pathways
ocg01110
Biosynthesis of secondary metabolites
ocg01120
Microbial metabolism in diverse environments
ocg01200
Carbon metabolism
Module
ocg_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OCA5_pHCG300470 (cbbL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
OCA5_pHCG300470 (cbbL)
Enzymes [BR:
ocg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
OCA5_pHCG300470 (cbbL)
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AEI08121
UniProt:
Q6LBA6
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All DBs
Position
pHCG3:49050..50510
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AA seq
486 aa
AA seq
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MNDQSMTIRGKDRYKSGVMAYKKMGYWEPDYVPKDTDVIALFRVTPQDGVDPIEAAAAVA
GESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPNSPGQYFAYIAYDLDLFEPGSISNLTA
SIIGNVFGFKPLKGLRLEDMRLPVAYVKTFQGPATGIVVERERLDKFGRPLLGATVKPKL
GLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNRAQAASGEVKGT
YLNVTAATMEDMYERAEFAKELGSCIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGHS
TYTRQKNHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDICREEFNPTKLE
HGIFFDQNWASLNKMMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPMGIQAGAIA
NRVALEAMILARNEGRDYVAEGPEILAKAAATCTPLKSALEVWKDVTFNYESTDAPDFVP
TAIAAV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcaatcgatgaccatccgcggcaaggaccgctacaagtccggcgtcatggcc
tacaagaaaatgggctattgggagcctgactacgttcccaaggacaccgacgtgatcgcg
ctgttccgcgtgactccgcaggacggtgttgatccgatcgaggcggctgccgcggtggcg
ggcgaatcctcgaccgcgacttggaccgtggtctggaccgaccgtctgacggcggcggag
aaatatcgcgcgaagtgttatcgcgtcgatccggtgccgaattcgccgggccagtacttt
gcctacatcgcctacgatctcgatctgttcgagcccggctcgatctcaaatctgaccgcg
tcgatcatcggcaacgtgttcggtttcaagccgctgaagggcttgcgtcttgaggatatg
cgtttgccggtcgcctacgtgaagaccttccagggtccagcgaccggcatcgtagtcgag
cgcgagcgtctcgacaaattcggccggccgttgcttggcgccacggtgaagccgaagctt
ggtctctcgggccgcaattacggccgcgtggtctatgaggcgctcaagggcggtctcgac
ttcaccaaggacgacgagaacatcaactcgcagcccttcatgcactggcgtgagcgtttc
ctctattgcatggaagcggtgaaccgcgcgcaagcggcatccggcgaagtgaagggaacg
tatctcaacgtcaccgcggcgacgatggaggacatgtacgagcgtgccgagttcgccaag
gaactcggatcctgtatcgtcatgatcgatcttgtgatcggctataccgccattcagtcg
atggcgaagtgggcgcgcaagaacgacatgatcctgcatctgcatcgcgcgggtcactcg
acatacacccgccagaagaaccatggcgtgtcgttccgcgtcattgccaagtggatgcgt
cttgccggtgtcgatcacatccatgccggcaccgtggtcggcaagctcgaaggcgatccg
aacaccacgcgcggctactacgatatctgccgcgaggagttcaacccgacgaagctcgaa
catggcatcttcttcgaccagaactgggccagcctcaacaagatgatgccggtggcatcc
ggcggcatccatgccggtcagatgcatcagcttctcgacttgctcggcgaggatgtggtg
ttgcagttcggcggcgggaccatcggccatccgatgggcatccaggccggtgcgatcgcc
aaccgcgtcgcgctcgaggccatgatcctggcccgcaacgaaggacgtgactacgttgcc
gaaggtccggaaattctggccaaggcggctgcgacctgtacgccgctgaagtcggcgctc
gaggtctggaaggacgtgaccttcaactacgaatccaccgatgcgccggacttcgttccg
accgcgatcgccgctgtttaa
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