Ochrobactrum sp. EEELCW01: GTN27_18430
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Entry
GTN27_18430 CDS
T07148
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ocl
Ochrobactrum sp. EEELCW01
Pathway
ocl00521
Streptomycin biosynthesis
ocl00523
Polyketide sugar unit biosynthesis
ocl00541
O-Antigen nucleotide sugar biosynthesis
ocl01100
Metabolic pathways
ocl01110
Biosynthesis of secondary metabolites
ocl01250
Biosynthesis of nucleotide sugars
Module
ocl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GTN27_18430 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GTN27_18430 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GTN27_18430 (rfbC)
Enzymes [BR:
ocl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GTN27_18430 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QTN05170
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Position
2:1216853..1217377
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AA seq
174 aa
AA seq
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MRFTSLNIDGAWSIEPERLEDERGWFARVYCEAAFAERQMETHFPQHSLSFSREEGTLRG
LHYQNEPHSETKLVTCLQGVIWDVLVDLRPHSPTYRRWAGVELSAENGVQLYIPEGCAHG
FQTLTSDVLVRYMISKPYAPDYATGLRYDDPSLGIPWPNRPSVISDKDLAWPLL
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcacttcgctcaacatcgatggcgcctggtctatcgagccggaaaggcttgag
gacgagcgcggctggttcgcgcgggtctattgcgaagccgccttcgcggagcgacagatg
gaaacacattttccgcagcacagcctgtctttctcacgcgaagaaggaacattgcgcggc
cttcactaccagaacgagccacattcggagaccaaactcgtcacctgcctgcagggcgtc
atctgggatgttctggtcgatctgcgcccgcattcacccacctacaggcgctgggccggc
gtggaactatccgccgaaaacggcgtccagctctacatccccgaaggctgcgcacatggc
ttccagaccctgacatctgacgtcctcgtgcgctacatgatctcgaagccctatgcacct
gattatgcgacaggcttacgctatgacgacccgtcgctcggcataccatggccgaacagg
cccagcgtcatttccgataaggatctggcctggccgctgctttag
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