Oceanobacillus zhaokaii: CUC15_09510
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Entry
CUC15_09510 CDS
T05570
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ocn
Oceanobacillus zhaokaii
Pathway
ocn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUC15_09510 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocn03019
]
CUC15_09510 (rny)
Messenger RNA biogenesis [BR:
ocn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CUC15_09510 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
AIG1
Motif
Other DBs
NCBI-ProteinID:
AXI09147
UniProt:
A0A345PGL7
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Position
1886556..1888121
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AA seq
521 aa
AA seq
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MDNPIIISILFVIILIVGIVVGYLIRKSIAEAKISSAESLAKQIVEEAHRNADAAKKEAL
LEARDENHKLRQQTEDELRERRAESTKFENRLTQKEENLDRKSETLDKRELLLEKKEQSL
AEKQQQIEEMESKVEAMKDEQQTELERISGYTSDQAKQIILERIEKEVQHESAIMIKEAE
NRAKEEADKKAKSILSLALQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETL
TGIDLIIDDTPEAVILSGFDPIRREIARMALEKLVQDGRIHPARIEEMVDKARREVDEYI
REIGEETTFEVGVHGLHPDLVKILGRLKYRTSYGQNVLKHSTEVAYLSGLLAAELGEDVT
LARRAGLLHDIGKAIDHEVEGSHVEIGKELAIKYKEHDIVINSIASHHGDEEATSVIAVL
VAAADALSAARPGARSETLENYIKRLEKLEEISESFEGVEKSFAIQAGREIRIMVKPDEI
DDLESVRVAREIRKQIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcctatcatcatctccattttgtttgttattatcctaatcgtcggtattgtt
gttggttatctgatacgtaaatctattgcagaagctaaaatttccagtgcggaatcatta
gcgaaacaaatcgttgaagaagcacatcggaatgctgatgccgctaagaaagaggcactc
cttgaagcgagagatgaaaaccataagcttcggcaacaaacagaggatgaactgcgcgaa
cgacgtgcagaatctacgaagtttgaaaatcgcctcacgcaaaaagaagaaaacctggat
cgaaaaagtgaaacactagacaaacgtgaattgttgttagagaaaaaagaacaatcatta
gcagaaaaacaacaacaaattgaagaaatggaaagcaaagtggaagctatgaaagatgag
cagcaaacggagcttgagcgcatttcaggatacacatcagaccaagccaaacagattatt
ttagagcggattgaaaaagaggtacaacatgagtcagcaataatgattaaagaagccgaa
aatcgagcgaaggaagaagcggataagaaagcgaagagtattctttcactcgcattacag
cgttgcgctgcagatcacgttgctgaaactacagtatctgtagtaaatcttccaaatgat
gagatgaagggccgtataattggtcgtgaaggacgaaatatacgtacacttgaaacatta
actggtattgatttaattattgatgatacacctgaagcagttattttatctggttttgat
ccaataagaagagaaattgctcgtatggcattagaaaaactagttcaagatggccgaatc
cacccagctagaattgaagaaatggtggacaaagctagacgtgaggttgacgaatatata
cgggaaattggagaagaaactacatttgaagttggtgtacatggtttacatccagatcta
gtcaaaatactaggacgactaaaatatcgtacgagctatgggcaaaatgtactgaaacac
tcaacagaggttgcgtacctttccggattgcttgctgctgaattaggtgaagatgttacg
ttagcaagaagagctggattgcttcatgatattggtaaagcaattgatcatgaggttgaa
ggtagccacgtagaaattggaaaagaactggcgattaaatacaaagaacatgatatagtc
atcaattcaattgcttcccaccatggtgatgaagaagcgacatccgttattgcagttctt
gtagctgcggctgatgcattgtctgctgctagacctggtgctaggagtgaaacattagaa
aactatattaaacgtttagagaaacttgaagaaatctccgagtcattcgaaggcgtagag
aagtcgtttgcaattcaagcagggcgagaaattagaattatggttaaaccagatgaaatt
gatgaccttgaatctgtgcgcgttgctagagaaataaggaagcaaattgagaatgaactt
gattaccctggtcacattaaagtaaccgtgattagagaaacaagagcagtagaatatgct
aaataa
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