Afipia carboxidovorans OM4: OCA4_c02240
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Entry
OCA4_c02240 CDS
T01967
Symbol
rlmN
Name
(GenBank) ribosomal RNA large subunit methyltransferase N
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oco03009
]
OCA4_c02240 (rlmN)
Enzymes [BR:
oco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
OCA4_c02240 (rlmN)
Ribosome biogenesis [BR:
oco03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OCA4_c02240 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
AEI01379
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Position
239713..240927
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AA seq
404 aa
AA seq
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MNPTMTPAEARTEAPLEKIAQEVYVAPEKPSLIGLSRDELMARLGELGVADKQRKMRAQQ
LWHWMYVRGARSFEEMSNVSKDMRAQLAAHFTVDRPEVVAEQVSNDGTRKWLLRMPGDGV
GRAHEVECVYIPETDRGTLCVSSQVGCTLNCSFCHTGTQRLVRNLTAGEIVGQVMVARDR
LNDWVDRETPNGNRLVTNVVMMGMGEPLYNFDAVRDALKIMSDGEGIGLSRRRITLSTSG
VVPNIARIGEETGVMLAISLHAVRDELRNELVPLNRKYPIAQLLDACRNYPGASNARRIT
FEYVMLKGVNDSLDDAKLLVKLLKGIPAKINLIPFNPWPGSVYECSDWEQIEQFSEYVFN
AGYSSPVRTPRGRDILAACGQLKSETEKLSVRERDALRAMAMTD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccacgatgacgccagcggaggcgcgcaccgaagcgcccctcgagaagatcgcg
caagaggtctatgtcgcgcccgagaagccctcgctgatcggcctgtcgcgcgatgagctg
atggcgcggctgggcgagcttggcgtcgccgacaagcagcgcaagatgcgcgcccagcaa
ctctggcactggatgtatgtgcgcggtgcgcgctccttcgaggagatgtcgaacgtctcg
aaggatatgcgcgcgcaactcgcggcgcatttcactgtggatcgccccgaggttgtcgcc
gagcaggtctcgaacgacggcacgcgcaaatggctgctgcggatgccgggtgacggcgtc
ggccgcgcgcatgaggtcgagtgcgtctacattcctgaaaccgatcgcggcacgctgtgc
gtgtcctctcaggtcggctgcacactcaactgttcgttctgccacaccggcacgcagcgc
ctcgtgcgcaatctcaccgcgggcgagatcgtcggccaggtgatggtggcacgtgaccgg
ctgaacgattgggtcgatcgcgaaacgccaaacggcaatcgtctcgtcaccaacgtggtg
atgatgggcatgggcgagccgctctacaatttcgatgcggtgcgcgatgcgctgaagatc
atgtcggatggcgagggcatcggcctgtcgcgacggcggatcacgttgtcgacctctggc
gtggtgccgaacatcgcgcggatcggggaagagaccggcgtgatgctcgcgatctcgctg
catgcggtgcgcgacgagttgcgcaacgaactggtgccgctcaatcgcaaatatcccatc
gcgcagcttcttgatgcgtgccgcaattatcccggcgcatcgaacgcgcgccgcatcacg
ttcgagtatgtgatgctgaagggcgtcaacgattcgctcgacgatgcgaaactgctggtg
aagctgctcaagggtattcccgccaagatcaatctcattccgttcaatccgtggccgggc
tcggtctacgaatgctcggactgggagcagatcgaacagttctccgaatacgtcttcaac
gcaggctattcctcgccggtgcgcacgccgcgcggccgcgacattcttgcggcgtgcgga
cagttgaaatcggaaaccgagaaattgtcggtgcgcgagcgcgacgcgctgcgcgcgatg
gcgatgacggattga
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