Afipia carboxidovorans OM4: OCA4_c08580
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Entry
OCA4_c08580 CDS
T01967
Symbol
pmbA
Name
(GenBank) peptidase U62, modulator of DNA gyrase PmbA
KO
K03592
PmbA protein
Organism
oco
Afipia carboxidovorans OM4
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oco01002
]
OCA4_c08580 (pmbA)
Peptidases and inhibitors [BR:
oco01002
]
Peptidases of unknown catalytic type
Family U62
OCA4_c08580 (pmbA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PmbA_TldD_3rd
PmbA_TldD_2nd
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
AEI02005
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Position
912913..914265
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AA seq
450 aa
AA seq
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MTALLDQSALTDLAERLVAAAKKAGADAADAVAVRGVSQGVEIRDGRVEESERAEGDDVG
LRVLVGKRQAVVSTNDIGGGNVAALAERAVAMAKVAPEDAFAGLADPALLAKTFPDLDLL
DPNVPSLDELEARAREAEEAALAVKGVTKSGSASAGSGIGGMVLVTSTGFHGAYLRSSQS
LSMTAIAGEGTGMERDYDFTSAIHGSDLEAPAAIGRSAGERAIARLNPRKVATCKAPVVF
APRVAGSLISHLAGAVNGASVARKTSFLKDKLGQVLFDSSIRIIDDPLRVRGLRSQTFDA
EGVAVQRRAIVDDGVLTTWLLDSATARELGMTTTGHAHRGVSSSPSPGAYNLHLEPGDVT
PEELMADIKDGFYITDLIGSGVNGVTGDYSRGASGFWIENGKPSYAVSEVTIAGHLFDIF
KSMRPANDLVFKYGVNSPTVRIEGLTIAGR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcccttctcgatcaaagcgcgctgaccgatctcgccgaacgtctcgttgcggct
gcgaagaaggcgggtgccgatgctgccgatgcggtggcggtgcgcggcgtctcgcaaggc
gtcgaaattcgcgatggccgtgtcgaggaatccgagcgcgccgagggtgacgatgtcggc
ctgcgcgtgctggtcggtaagcggcaggcggtcgtctcaaccaacgatatcggcggcggc
aatgttgccgctcttgccgagcgcgcggtggcaatggcgaaagtcgcgccggaagatgcg
ttcgcgggtctcgccgatcccgcgctgcttgcgaagactttccccgatctcgatctgctc
gatccgaacgtgccctcgctcgacgaactcgaagcgcgggcccgcgaagcggaagaggcc
gcgcttgcagtgaagggtgtcaccaaatcgggtagcgcgtcggccggctccggcatcggc
ggcatggtgcttgttaccagcaccgggtttcatggcgcctatctgcgttcgagccagagc
ctgtcgatgaccgcgattgcgggcgagggcaccggcatggagcgcgattacgatttcacg
tccgcgatccatggctcggacctcgaagcaccggctgcgatcggccgcagcgccggtgag
cgtgccatcgcgcgcctcaatccgcgcaaggtcgcaacctgcaaggcgccggtggtgttc
gccccccgcgtggccggctcgttgatcagccatcttgcgggcgcggtgaacggtgcctcc
gttgcgcggaagacgagcttcctcaaggacaagctcgggcaggtgctgttcgattcttcc
atccgcatcatcgacgatccgctgcgtgtgcgcggcttgcgctcgcagacgttcgacgcg
gaaggcgttgcggttcagcgccgcgcgattgtcgatgacggcgtgctcaccacctggctg
ctcgacagcgccaccgcgcgcgaacttggcatgacgacgaccggccatgcccatcgcggc
gtatcatcttcgccgtcgcctggcgcctacaatctgcatctcgaacccggcgatgtgacg
ccggaagaattgatggccgacatcaaggacggtttctacatcaccgacctgatcggctcc
ggcgtcaacggtgtcaccggcgattacagccgcggcgcgtcgggcttctggatcgagaac
ggcaagccgtcctatgcggtgagcgaagtgacgatcgcgggccatctgttcgatatcttc
aagtcgatgcggccggcgaacgatctcgtgttcaagtacggtgtgaattcgccgacggtg
cgaatcgagggactgacgattgccgggcgctag
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