Afipia carboxidovorans OM4: OCA4_c13390
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Entry
OCA4_c13390 CDS
T01967
Name
(GenBank) GGDEF/EAL domain protein
Organism
oco
Afipia carboxidovorans OM4
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
MHYT
PAS_7
GGDEF_2
Hum_adeno_E3A
Se_S_carrier
Motif
Other DBs
NCBI-ProteinID:
AEI02479
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Position
1443435..1445849
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AA seq
804 aa
AA seq
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MLRILNCLQTQHDWRLVLLAAGVCVLASIATINMYQRARANKAKSRLFWTLAAGLVCGCG
VWSTHFIGMLAYSPGVPITFDFTMTMVSFAVAVVMMTAGFVAAIYGERTWSSLVGGVIVG
IAISVMHHLGIVALRMSADIVWMPDLLVLSAVCGIVFSTLSLFTVRQGTAITHSGIAAAL
LATATLSDHIIAVSAIGLIPDINTVSDEAGLSPIVLSISVASMMVAIVIACLIGAISDRR
SRRHMNERNIQLNAAIQNIMQGLCMFGPDNCLQLWNDKYVSMYRIAPEDIRVGATVEELF
AARKKAGTIVKELDFYSTRLWDSVKNRESARWVLELVDGRTISVAYQAMENGGWVGTHED
ITEQRKSEARIQYLAQHDSLTGLFNRVAFNDHVRKVWQKAAAQKHPFTILSLDIDRFSEI
NDTYGHSTGDAFLREAARRLQAACGSAFIARLGGDEFMIVSSEGEQPARAGDICTRVLTA
FEMMFNIDGHAIHSGCTVGVSIYPQDGEDIETLISNAGVALYRAKKEERGSIRFFEPEMD
RQLREKRVMLHDLDLVLENKQLELHFQPQADPDGTPFGFEALVRWRHPEKGLVPPGVFVP
LAEETGAIVAIDEWILRKACQEAASWPKPLSIAINVSPMSFQHNDLPGLIHSILLETGLN
PKRLEIEITEGVLVQDFSRACSILRRIKNLGVRVAMDDFGTGYSSLSYLQSFPFDKIKID
QAFVAQINKNVQSSAIIRAIISLGEALNLGVIAEGVETELQRDFLADAGCFEMQGYLIGR
PQPIAAYAGIVGRPPETSKTAMVG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaattctcaactgcctgcaaacccaacatgactggagactggttctcctggcg
gctggtgtttgcgtgctggcgagtattgcgacgatcaacatgtatcaacgcgcgcgcgcg
aacaaggcgaagtcccgcctgttctggacgcttgcggccggcctcgtttgcggttgcggc
gtgtggtcgacgcatttcatcggaatgctcgcttattcgcccggcgttccgatcacgttc
gatttcaccatgacaatggtgtcgttcgcggtcgcggtcgtgatgatgacggccggattc
gtcgcggcaatctacggcgagcggacgtggtcgtcgctggtcggcggcgtgatcgtcggc
attgcgatttcggtgatgcaccatctcggcattgtcgcgctgcggatgtcggccgatatc
gtctggatgccggatctgctggtgctgtcggccgtctgcggcatcgtcttcagcacgctg
tcgctgtttacggtgcggcagggcaccgccatcacccatagcggcattgcagccgcactg
ctcgccaccgcgacgttgtccgatcatatcatcgcggtgagcgcgatcgggctgatcccg
gatatcaacaccgtttcggacgaagccgggctttcgccgattgtgctgtcgatcagcgtt
gcgtcgatgatggtggcgatcgtgatcgcctgcctgatcggcgcgatttcggatcgccgc
agccgccggcacatgaacgagcgcaacattcagctcaatgccgcgatccagaacatcatg
cagggtctgtgcatgttcgggccggacaattgcctgcagctctggaacgacaagtacgtc
tcgatgtaccggatcgcgcccgaggatatccgtgtcggcgcgaccgtcgaggaattgttc
gccgcgcgcaagaaggcgggtaccatcgtcaaggagctcgatttctattccacgcggctg
tgggattcggtgaagaaccgcgagtccgcgcgctgggttctcgaactggtcgacggccgc
accatcagcgtcgcgtatcaggcgatggagaatggcggctgggtcggcacccatgaggac
atcaccgagcagcgcaagagcgaagcccgcattcagtatctcgcccagcacgactcgttg
accggtttgttcaaccgcgtcgccttcaacgatcacgtccgcaaggtctggcagaaggcg
gcagcccagaagcatccgttcacgatcctcagcctcgatatcgaccgcttcagcgagatc
aacgacacctacggccacagcacgggcgacgcatttctgcgggaagccgcgcggcgtctg
caggccgcctgcggcagtgcgttcatcgcccgcctcggcggcgacgagttcatgatcgta
tcctcggagggcgagcagcccgcgcgcgccggcgatatctgcacgcgggtgctgaccgcc
ttcgagatgatgttcaacatcgacggtcatgcgatccacagcggctgcaccgttggtgtc
agcatctatccgcaggacggcgaggatatcgaaacgctcatcagcaatgccggcgtcgcg
ctctatcgcgccaagaaggaggagcgcggctcgatccgtttcttcgagccggagatggac
aggcagcttcgcgagaagcgcgtgatgctgcacgatctcgacctcgtgctcgagaacaag
cagcttgaactgcatttccagccgcaggcggaccccgacggcacaccgttcggattcgag
gcgctggtgcgctggcgtcatccggaaaaggggctggtgccgccgggcgttttcgtgccg
ctcgccgaggagaccggcgcgatcgtggcgatcgacgaatggattctgcgcaaggcctgt
caggaggccgcgagctggccgaagccgttgtcgattgcgatcaacgtctcgccgatgagc
ttccagcacaacgatctgccgggcctcatccactccatccttctggaaaccggcctcaac
ccgaagcggctcgagatcgaaatcaccgaaggcgtgctggtgcaggatttctcccgcgcc
tgctcgatcctgcgccggatcaagaacctcggcgtccgggttgcgatggatgatttcggc
accggttattcgtcgctgtcgtatctgcagtcgttcccgttcgacaagatcaagatcgat
caggcgttcgtcgcgcagatcaacaagaacgtgcagtcctccgcgatcatccgtgcgatc
atcagcctcggcgaggcgctcaatctcggcgtcattgccgagggcgtcgagaccgagctg
cagcgggatttcctcgccgatgcgggatgcttcgagatgcagggctacctgatcggccgc
ccgcagccgatcgctgcttatgccggtatcgtcggccgcccgcccgagacgtcaaagacg
gcgatggtcgggtag
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