Octadecabacter sp. SW4: FTO60_05250
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Entry
FTO60_05250 CDS
T06209
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
oct
Octadecabacter sp. SW4
Pathway
oct00300
Lysine biosynthesis
oct00550
Peptidoglycan biosynthesis
oct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FTO60_05250
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FTO60_05250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
oct01011
]
FTO60_05250
Enzymes [BR:
oct01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FTO60_05250
Peptidoglycan biosynthesis and degradation proteins [BR:
oct01011
]
Precursor biosynthesis
Amino acid ligase
FTO60_05250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF2249
LpxD
Motif
Other DBs
NCBI-ProteinID:
QEE35171
UniProt:
A0A5B9ENN8
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All DBs
Position
1044760..1046259
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AA seq
499 aa
AA seq
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MGNRAAPDHKTSSLAALGLTARAGREAQITGLTVDSREVRTGVLFAALPGARVHGGEFIK
FALQMGAGAILTDAQGAEIAAAELANSDAALIVAQDPRQALAQTASLWFGPHPDTVIAVT
GTNGKTSVSTFARQIWVEMGLMAVNLGTTGVEGAWTHPLKHTTPEPITLHRVMAQASGAG
VTHVAMEASSHGLEQRRLDGVVLAAAGFTNFTQDHLDYHHTFEAYFDAKMGLFTRILPDD
GVAVINLDDPKGPLVAQIAEERGQEVIGVGRSADARLRLLGQRMDATGQEVRFDWQGRTH
VTRLNLIGDFQADNVLLAAGLVIAAGGDPAEVFDTLPHLSTVRGRMQLAATRDNGASVFV
DYAHTPDAISTALQAMRPHVMGRLIAIVGAGGDRDATKRPLMGQAAAENADVVFVTDDNP
RSEDPATIRAAVMLGCPDAIEVGDRAEAILRGVDALQPGDALLIAGKGHESGQIVGDDVL
PFDDAEQASVAVAALDGRI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatcgcgcggcaccggatcacaagacatcatcgctggccgcgttgggcctgact
gcgcgcgccgggcgcgaggcgcagatcaccggactgaccgtcgatagccgcgaggtgcgg
accggcgtcttgttcgcggcccttcccggtgcgcgggtccacggcggtgaattcatcaag
tttgccttgcagatgggggcgggcgcgatccttacggatgcgcagggtgccgagattgcc
gcggccgaactggccaatagtgacgccgccctgatcgtcgctcaggacccgcgccaggcg
ttggcgcaaaccgcgtcgctgtggtttgggccgcatcccgacaccgtgatcgccgtgacg
ggcacgaacggcaagacatccgttagcacattcgcccgccagatctgggtggagatgggg
ttgatggccgttaatcttggcaccacgggcgtcgaaggtgcctggacccatccgctgaaa
cataccacgccggaaccgatcaccctgcaccgggtcatggcgcaggccagcggcgcgggc
gtgacccatgtggcgatggaagcctcaagccacggtttggaacaacgccgtctggacggg
gtggtgctggccgctgccggtttcaccaatttcacccaggaccaccttgattatcaccac
acattcgaggcctattttgacgccaagatggggctgttcacgcgcattttgcctgacgat
ggcgtggccgtgatcaaccttgacgaccccaaggggccgcttgtcgcgcaaatcgccgaa
gaacgcgggcaagaggtgatcggcgttggccgatccgccgatgcccgcctgcgcctgttg
ggccagcgcatggacgccaccgggcaggaagtgcgctttgactggcagggccgcacccat
gtgacccgtctgaacctgattggcgactttcaggctgacaacgtgctattggccgccgga
ctggtgattgccgcaggtggcgacccggccgaagtgttcgacaccctgccgcacctgagc
actgtgcgcggtcgcatgcaactggccgcaacccgcgacaatggtgcgtccgtttttgtc
gattacgcacatacgcccgatgctatttccaccgccctgcaggcgatgcgcccgcatgtg
atggggcgcctgattgccatcgtcggtgcgggtggggaccgagatgccaccaaacgcccc
ttgatggggcaggctgcggctgagaacgccgatgtggtctttgtcaccgatgacaatccc
cgctcggaagatcccgcgacgatccgtgcggccgtgatgcttggctgtcccgatgcgatc
gaggtgggcgaccgcgccgaagcgatcctgcgcggcgtcgatgcattgcaacccggtgat
gcgctgttgatcgcgggcaagggccacgaaagcgggcagatcgtcggtgacgatgtgctg
ccctttgatgatgccgaacaggccagcgtggccgtggctgccctggacgggagaatctga
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