Oryctolagus cuniculus (rabbit): 100339047
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Entry
100339047 CDS
T03373
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100339047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100339047
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100339047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
TPR_14
NRDE-2
TPR_19
TPR_6
TPR_16
Motif
Other DBs
NCBI-GeneID:
100339047
NCBI-ProteinID:
XP_002709085
Ensembl:
ENSOCUG00000015417
UniProt:
G1T9E3
LinkDB
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Position
1:complement(186238174..186327959)
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AA seq
717 aa
AA seq
DB search
MSGDAATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAIKRPNEDSDDDEEKGAVVPPVHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagacgcagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gctgaaaagaaattagaagagaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggtcgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttacctttcatatgtccgagaaaccaagggtaaactaccgagttacaaagaa
aaaatggctcaagcttatgattttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattacatcaatttcttaaaaggcgtggaagctgttggatcttatgca
gaaaaccagagaataacagctgtccgaagagtttatcaacgaggttgtgtaaacccaatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattacatgaatgctagacgtgtagcg
aaggaatatgagactgtaatgaaaggtttggatcgcaatgctccctcagtgcctcctcag
aatactcctcaagaagcgcagcaggtggatatgtggaagaagtacatacagtgggagaag
agcaaccctcttcgcacagaggaccagacccttataacaaagagagttatgtttgcttat
gaacagtgcctacttgtgctgggccatcatcctgatatttggtatgaagctgcccagtat
cttgagcaatcaagtaaactgctcgcagagaagggggatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagggccataagcactttattgaagaagaatatg
cttctatattttgcatatgcagattatgaagagagtcgcatgaagtatgagaaggtccac
agtatatataacagacttctggcaattgaggatattgacccaaccttggtatatatccaa
tatatgaaattcgcaaggagagcagaaggtatcaaatctggaagaatgatatttaaaaaa
gcaagagaagacaccagaactcgccaccatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatcagttgcctttaagatttttgagctggggctaaagaaatat
ggagatattccagaatatgtcctggcctatattgactatctctctcacctcaatgaggac
aataacacccgagttctgtttgaacgagttttaacatctggaagccttcctccagagaag
tctggagaaatctgggcccggtttctagcttttgaaagtaatattggtgacctagccagt
atactcaaagtggagaaaagaagatttacagccttcaaagaagagtatgagggcaaagaa
acggctttgctggtagacagatacaagttcatggatttatatccttgctctgccagtgag
ctgaaagcgctgggttacaaggatgtttcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgtcctgaaagatgaagtggacagaaaaccagaa
taccctaagccagacactcagcagatgattccatttcagccacggcatttagcacctcca
ggcttgcaccctgtccctggtggagtgttccctgtcccccctgcagccgtcgttttaatg
aaacttctccctcctcctatctgtttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaacactgtcgaggaagctgtgaggatcattact
ggaggggccccagagctggctgtagaaggcaacggcccagtggaaagtaacgcagtgctc
accaaggccatcaagaggcccaacgaggactcggatgacgatgaagaaaagggagctgtc
gtcccccccgttcacgacatttacagagcgcggcagcagaagcggatccgatga
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integrated database retrieval system
