Oryctolagus cuniculus (rabbit): 100343308
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Entry
100343308 CDS
T03373
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100343308
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100343308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
100343308
NCBI-ProteinID:
XP_002713270
Ensembl:
ENSOCUG00000017577
UniProt:
G1TDZ9
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All DBs
Position
9:complement(97220963..97371482)
Genome browser
AA seq
1467 aa
AA seq
DB search
MSDESASGSDPDLDPDVELEDAEEEEEEEEVAVEEHDRDDEEDLLDDPSLEGMCGPEHAQ
LGEDGQQPPRCASTTSSQSEPSEQLRRHQGKILASEDPKKKRAQKPSHMRRNIRKLLRED
QLEPVTKAAQQEELERRKRLEQQRKDYAAPIPTVPLEFLPEEIVLRASDGPQLPPQVLAQ
EVICLDSSSGSEDEKSSRDEVIELSSGEEDTLHIVDSSESVSEEDEEEEKGGTHVNDILN
QHDSLGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSGFG
CILAHSMGLGKTLQVISFIDVLFRHTPAKTVLAIVPVNTLQNWLAEFNMWLPAPETLPAD
NKPEEIQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGR
TKKSKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALK
NIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQD
VRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRFRD
CGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEELGSAGTSARCLPP
GTKGKGEDNTLASSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTGVLENS
PKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCLPGAEGQGAQKWVRNV
SYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNP
CHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNPMLNFTR
KEVENLLHFVEKEPAPQTSLNVKGIKESVLQLACLKYPHLITKEPFEHESLLLNRKDHKL
TKAEKKAAKKSYEEDKRTSVPYTRPSYAQYYPASDQSLTSIPAFSQRNWQPTLKGDEKPV
ASVRPVQSTPIPMMPRHVPLGSSVSSASSTNPSMNFPINYLQRAGVLVQKVVTTTDIVIP
GLNSSTDVQARINAGESIHIIRGTKGTYIRTSDGRIFAVRATGKPKAPEDGRMAAAGSQG
PSQESTSNGRHSASSPKAPDPEGLARPVSPDSPEIISELQQYADAAAARESRQSSPSTNA
ALPGPPAQLVDSSAVPGTALGTEPRLGGHCLNSSLLVTGQPIGGRHPVLDLRGHKRKLAT
PPAAQESTRRRSRKGHLPAPVQPYEHGYPVSGGFAMPPVSLNHNLTPPFTSQAGENSLFM
GSTPSYYQLSNLLADARLVFPVTTDPLVPAGPVSSSSTATSVTASNPSFMLNPSVPGILP
SYSLPFSQPLLSEPRMFAPFPSPVLPSNLSRGMSVYPGYVSPHAGYPAGGLLRSQVPPFD
SHEVAEVGFSSNDDEDKDDDVIEVTGK
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaatccgcctcagggagcgatccagacctggacccggacgtggagctggag
gatgcggaagaggaggaggaggaggaggaggtggcagtggaggagcacgatagggatgac
gaggaagacctgctggatgacccatctctggaaggcatgtgtggccctgagcatgcccag
ctgggggaagatgggcagcagccgccacggtgcgcctcaactacctcatctcaatctgag
ccttcagagcagcttaggcgccaccaaggcaagatcctagcctccgaggaccccaaaaag
aagagagcccagaagccctcccacatgaggagaaacatacgaaagctactccgggaagat
cagttggagccagttaccaaagcagcacaacaggaagagttggaaagaagaaagcgtctg
gagcagcagaggaaggattatgcagcccccattcccacagttcccctggagttcctccca
gaggagattgtcttaagagcaagtgatggtccccagctgcctcctcaggtcttggcccag
gaagtcatttgtctggacagtagcagtggcagtgaggatgaaaaaagcagtcgagatgag
gtgattgaactgagctctggagaggaggacactctgcacattgtggacagcagtgagtct
gtcagtgaggaggatgaggaagaggagaaggggggcacccatgtgaatgatatcttgaac
cagcatgactctcttgggcgggtccttgtcaacctgaaccaccctccagaggaggagaat
gtcttcctggcccctcagttggcccgggccgtgaaacctcatcagattggtggaatccgg
ttcctgtatgataacctagtggagtccctggagagatttaagaccagtagtggctttggc
tgtatcctggcccacagcatgggtctggggaagactttgcaagtgatctccttcattgat
gtcctcttccgccacacgccagccaaaacagtccttgccattgtgccggttaataccctt
caaaattggctggcagagttcaatatgtggctcccagctcctgaaacccttccagctgac
aacaagcctgaagaaatccagcctcgattttttaaagttcacatcttgaatgatgagcac
aagacgatggcatctcgtgctaaagtgatggctgattgggtgtcagagggtggggtgctg
ctgatggggtatgaaatgtacagactcctcactctgaagaaatcctttgccacaggtaga
acgaagaagtccaagaaacgctctcacccggtcatcattgatctggatgaggaggatcgc
cagcaggagtttcggagagagtttgagaaggccttatgccgccctggccctgatgtggtg
atctgtgatgagggccaccgcatcaaaaactgccaggccagcacctcacaggctctgaag
aacattcgctctcgccgccgggtggtgctgactgggtaccccctgcagaacaacctcatc
gagtattggtgcatggtggactttgtgcgtccagacttccttggcacccggcaagaattc
agcaacatgtttgaacgccctatcctgaatgggcagtgtattgacagcacgcctcaggat
gtccgcctcatgcggtaccggagccatgtcctgcatagcctcctagagggctttgtgcag
aggagaggccacactgtactgaagattcatctgcctgccaaggaagagaatgtgatccta
gtgcggctctccaagatccagcgagacttgtacacgcagttcatggaccgcttccgggat
tgtggcagcagcggctggctggggctcaaccctctcaaggctttctgcgtgtgctgcaag
atctggaatcaccctgatgtgctgtatgaagctcttcaaaaggaaaacctggctaatgag
caggacctggatgtggaagagcttggctctgcggggaccagtgcccgctgcctgccccca
ggaacaaaaggcaagggggaagataacactttggcttcctcgatgggagaggcaaccaat
agcaagttcctacagggagttggcttcaaccctttccaggagcgaggcaacaacattgtc
acatatgaatgggctaaggaccttctgactaattaccagactggagtcttagagaactct
cccaagatggtactccttttccacttgattgaggaaagtgtgaagcttggggataagatc
ctcgtgttcagccagagcctttccaccttggctctcattgaggagttcttggggaaacga
gaagtgccctgtctgcctggtgccgagggacaaggagcacagaagtgggttcgcaacgtc
agctacttccggctggatggtagcacccctgcctttgagagagagcggctcattaatcag
ttcaatgatcctagcaaccttaccacctggctcttccttctctccacacgggctggatgc
ttgggtgtgaatctgattggtgccaaccgagtggtggtgttcgatgcttcctggaaccct
tgccatgatgcccaggcagtatgtcgggtataccgatatggccagaaaaagccctgtcac
atctatcgccttgtggccgattacacccttgaaaagaagatctatgatcgtcagatttcc
aagcagggcatgtcagatcgggtggtggatgatctaaatccgatgctgaacttcacccgg
aaggaagtggagaatctactgcacttcgttgagaaggagccagctccccaaacatccttg
aatgtgaaggggattaaagagtcagtcctgcagcttgcctgtctgaagtaccctcacctt
atcaccaaggagcctttcgagcatgagtcattgctcctcaaccgaaaggatcacaagctg
accaaagctgagaaaaaagcagcaaagaaaagctatgaggaagacaaacgcacatcagtc
ccctacacccgcccgtcgtatgctcagtattatcctgccagcgaccagagcctgaccagc
atccctgccttcagtcagagaaactggcagccaacactgaaaggtgatgaaaagcctgtg
gccagtgttcgtcctgtccagtccactcccatcccaatgatgccccggcatgtcccactg
ggaagcagcgtaagctctgcctccagcacaaatccatccatgaacttcccgatcaactac
ttgcagcgtgcgggagtccttgtgcagaaggtggtcaccacaacggatattgttattcct
gggctcaacagctccacagatgttcaggcaagaattaatgctggtgagagcattcacatc
atccgtgggacaaaagggacgtacatccgtaccagtgatgggcgaatctttgccgtccgg
gcgactggtaagccaaaggcccctgaagatggtcggatggctgctgcaggttcccagggg
ccttctcaagaatccacaagcaacggcagacacagtgcctcatcacccaaagcccctgat
cctgaggggctggccaggcccgtctctcctgacagcccggagatcatcagtgagctccag
cagtacgcagatgcagctgctgcccgggaatcccgtcagagctccccaagcaccaatgcc
gccctgcctggccctccggcccaactcgtggacagcagtgctgttcctgggacagctctt
gggactgagcctcgacttgggggtcattgcctcaatagttccctcttggtgactggccag
cccattggtggcaggcacccagtgctggacttaaggggccacaagcgaaagttggccact
ccacctgccgcccaggagtcaacccgtcggcggtccaggaagggccatctgccagccccc
gtgcagccgtatgaacacgggtatccagtctctggcgggtttgccatgccacccgtctcc
ttaaaccataacctcaccccccccttcacctcccaggctggggagaactccctgtttatg
ggtagtaccccctcctactaccagctgtccaatttgctggcagatgcccgcctggtattt
ccagtgactactgaccctctggtgccagcaggccccgtcagttcctcttccacggctacc
tcagtcactgccagcaacccctctttcatgctcaacccctctgtgccagggatactaccc
agctattcactcccattctcgcagccactcctgtccgagccaaggatgtttgcgcctttt
ccttcccctgtcttgcccagcaacctttcgcggggcatgtctgtctacccaggctatgtg
tccccacatgcaggctacccagctggtggcctcctccggtcccaggtgcctccgtttgac
tctcacgaggtcgccgaggtgggcttcagctccaatgatgatgaggataaggacgatgat
gtgatagaggtcactgggaaatag
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