Oryctolagus cuniculus (rabbit): 100345784
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Entry
100345784 CDS
T03373
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100345784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345784
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100345784
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100345784
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
100345784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Nuf2_DHR10-like
HDA2-3
HAP1_N
FapA
Motif
Other DBs
NCBI-GeneID:
100345784
NCBI-ProteinID:
XP_008268053
Ensembl:
ENSOCUG00000000741
LinkDB
All DBs
Position
18:complement(2620119..2694300)
Genome browser
AA seq
1490 aa
AA seq
DB search
MSNEGVPHSHETQGLDCLPSECIQSDAEMAIQEEDTEGMEVEGEALLPPRVPGDGPSTSA
GDGMSTAARRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSAIH
KASCVAQLADAEKEYGSVLDDLAACTTSLRQINKIIEQLSPQAATNKDVSRKLDSVKRQK
YNKEQQLKKITAKQKRLQAILGGAEARVELDHARLGAEDAEPGPSSLGSMLMPAQEAAWE
ELVRTGQMTPFGTRIPQKQERKPRRLMLDEASGFEKYLAEQAKLSLERKKRAGGTRAARK
APAAVPATLSPAPGGSEPGSRSRALSRADKRLKQHMKKLQRRARQFQGGLGLLRRGRPSE
PRAGPGAAGDSEAEGSGDCPTDGEGPGAVAGADLSGDGPDYELKPLPQGRSRRQRAPAQE
VDEDFFPSSEEDEEDGGAAAAAAGNRRKAARCRDDGDEDSYRQRLRRWNRLRLRDRGERG
EREADSEESDAEFDEGFRVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTI
QIIAFLASLSYSKIRTRGSNYRFEGLGPALIVCPTTVMHQWVKEFHTWWPPFRVAILHET
GSYTHKKEKLIREIAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTL
ACKQFRTPHRLILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNAS
PVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFI
DSKEVYAILNGEMQIFSGLVALRKICNHPDLFSGGPKNLRGLPEEELEEDQFGYWKRSGK
MIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAQKYTYLKMDGTTTIASRQPLITR
YNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVY
RLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSA
IFAGTGSDVQTPRRHLKRKSQPALGTDRGLPEGRALAESPASANDAPVPAEKPKAAGVEV
NAGASEEGGPLQGDPPTRGSATPGDGLGEEPHATSRPEDSQAGGGSGTCPDAAGRGQAPG
LCSEESTDTRPGLSSPREGCRAEAGPLWESEQTENSSLKHKAKTKHQNVAREGSPGKCAT
PKQQPRSSRPRRDAKFEGTRISHLVKKRRYRKQDNEDAREAGARSTDDYVLEKLFKKSVG
VHSVMKHDAIMDGASPDYVLVEAEANRVAQDALRALRLSRQRCLGATSGVPTWTGHRGAS
GAPAGGRSRFGQKRNSHLSAQCPTEKRQDSVAGQEGKDRGPGHFSGHAEEAESSSGAPSS
SSLLAKMRARNHLIVPERLESEDGHLLGAAGPAPAPSATEHDELLVEVRNFIAFQARVDG
QASTQEILREFESRLSASQSCVFRELLRNLCTFRRAAGGEGIWKLKPEYC
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatgaaggagtcccccactcacatgaaactcagggtttggactgtttaccaagt
gagtgcatccagagcgatgcagaaatggccatccaagaggaagacacagaagggatggag
gtggagggggaggcactcctgcccccccgggtccctggcgatggcccatccacttccgct
ggggacggcatgtcaacagccgcgaggagagggccggccctgctgcacatcgacagacac
cagatccaggcagtggagccgagcgcgcaggcgctagagctgcagggtctgggcgtggac
gtctacgaccaggctgtgctggagcagggcgtgctccagcaggtggacagcgccatccac
aaggccagctgcgtggcccagctcgctgacgccgagaaggagtatggctcggttctggat
gacctcgcggcctgtacgacatccctaaggcaaatcaataaaattattgaacaactcagc
ccgcaagctgccaccaacaaagatgtcagcaggaaactggattccgtaaagcggcagaag
tataataaggaacaacagctgaagaagatcactgccaaacagaagcgtctccaggccatc
ctgggaggagcggaggcccgagtcgagctggatcacgccaggctgggggcggaggatgca
gagccagggccgtccagtctgggcagcatgctcatgcccgcccaggaggcagcctgggag
gagctcgtccgcaccgggcagatgacgccctttgggacccggattcctcagaagcaggag
cggaagcccaggaggctgatgctggacgaggcgtcgggcttcgagaagtatttggccgag
caggcgaagctgtccttggagaggaagaagcgagccggcggcaccagggcagccaggaag
gccccggccgccgtccccgccacgctgagcccagcccctgggggcagtgagccgggctcg
agaagcagggcgctgtccagggcagacaagcgcctgaagcagcacatgaagaagctgcag
aggcgggcacgccagttccagggcggcctggggctgctgcggcgggggaggccatcggag
ccccgggcagggcccggagcagccggcgactccgaggctgaggggtctggggactgcccc
acggacggggaggggccgggggccgtggccggtgcggacctgtctggagacggccccgac
tatgagctgaagcctttgccgcagggcaggagccggcggcagagagccccagcgcaggag
gtggatgaagacttcttccccagctctgaggaggacgaggaggacgggggagctgcagcc
gcggccgcggggaaccgtcggaaggcggcacggtgccgagacgacggcgacgaggactcc
taccggcagcggttaaggagatggaaccgactgagactgcgggaccgaggggaacgcggg
gagcgcgaggctgactccgaggagagcgacgccgagtttgacgaaggcttccgcgtgccg
ggctttctgttcagaaagcttttcaagtaccagcagacaggtgttcggtggctgtgggaa
ttgcactgccagcaggcaggaggaattctgggagacgagatgggattgggcaagaccatc
cagataattgccttcttggcaagtctgagctacagcaagatcaggactcgcggttcaaat
tacaggtttgaggggctgggtccggctctgattgtgtgtccgacaaccgtgatgcatcag
tgggtgaaggagttccacacgtggtggcctccgttcagagtggcgattctgcacgaaact
gggtcctacacccacaaaaaggagaagctgattcgggagattgctcactgtcacgggatc
ctgatcacctcctactcctacattcgcctgatgcaagatgacattagcaggtacgactgg
cactacgtgatcctggacgaaggacacaaaatccggaatccaaatgccgccgtcacgcta
gcctgcaagcagttccgcacgccgcaccgcctcatcctgtccggctcgccgatgcagaac
aacctccgggagctctggtcgctcttcgacttcatcttccccgggaagttgggcaccttg
cccgtgttcatggagcagttctcggtccccatcaccatggggggctattccaacgcctcc
ccagtgcaggttaagaccgcgtacaagtgcgcctgtgtcttacgagacaccataaaccca
tacctgctgcggagaatgaagtcagacgtcaagatgagcctttctctgccggacaaaaac
gagcaggtcttattttgccgtctcacagatgagcagcataaagtctaccagaatttcatt
gattccaaggaagtatatgcgatcctcaatggagagatgcagatcttctctggacttgta
gccctcagaaaaatctgcaaccaccctgatctcttttctggaggtcccaagaatctccga
ggtcttcctgaagaagagctagaggaagatcagtttggatactggaaacgctctgggaag
atgatcgtggtcgagtcgctgttgaagatctggcacaagcagggccagcgagtgctgctg
ttctctcagtccaggcagatgctgcacatactcgaggtgttcctcagagcccagaagtac
acctatctcaagatggacggcaccacgaccatagcgtccagacagcctctgatcacccgg
tacaacgaggacacgtccatatttgtgtttcttctgacgacacgagtgggcggcttagga
gtcaacctgaccggagccaacagagtcatcatctacgaccccgactggaacccgagcacg
gacacacaggcccgggagcgcgcgtggagaataggccagaagaagcaggtgaccgtgtac
cggctcctgaccgcgggcaccatagaagagaagatctaccaccgacaaatcttcaagcag
tttttgacaaacagagtgctaaaagatccaaagcagaggcggttcttcaaatccaatgac
ctctacgagctgttcacgctgaccagccccgacgcgtcccagagcaccgagaccagtgcc
atttttgcagggaccgggtcagatgttcagacccccagacgccatctcaaaagaaagagc
cagccagccttgggaacggaccggggccttccagaaggcagagcgcttgccgagtctcct
gcgtcggcaaacgatgccccggtgcccgcagagaaacccaaggccgctggagtggaagtg
aatgcaggggcttctgaggaaggcggccctttgcaaggagaccctcccacaaggggcagc
gcgactcccggcgacgggctgggagaggagccgcatgccacgtctcggccggaggactct
caggccggcggtggcagcgggacatgtccagacgccgcaggacgtggccaggcccctggg
ctgtgcagcgaggagagcacggacaccaggccgggcctctcttctccaagagaaggctgt
cgggctgaagccgggcctctctgggagagcgaacagacagaaaatagttctcttaagcac
aaggcaaaaacgaaacatcagaacgtggccagagaagggagccccgggaaatgcgcgacc
ccaaagcagcagccccggagctccaggccccgcagggacgccaagttcgaggggactcgg
atctcacacctggtgaagaagaggcggtaccggaagcaggacaacgaagacgcgcgggag
gccggggcccggagcactgacgactacgtcttggaaaagcttttcaagaagtcagtcggc
gtgcacagcgtcatgaaacacgacgccatcatggatggggccagccccgactacgtgctg
gtggaggctgaagccaaccgagtggcccaggacgccctgcgagccctgagactgtcccgg
cagaggtgtctgggcgccacgtcaggggttcccacctggactggccacaggggagcatct
ggggccccagcaggaggaaggagtaggtttggtcagaagaggaattcgcacctgtctgcg
cagtgtcccacggagaagcgccaggacagcgtcgcggggcaggaaggaaaggaccgtggc
cctgggcacttcagtggccatgcagaagaagcagagtcttcgtccggggcgccttcctcg
tcctcgctgttggccaagatgagagcgagaaaccacctaatcgtgcctgagcggttggag
agcgaagacgggcacctcctgggggctgctggccccgcccccgcccccagcgccacagag
cacgacgagctgctggtggaggtgaggaacttcatcgccttccaggcgcgtgtggacggc
caggccagcacgcaggagatcctgcgcgagttcgaatccaggctgtccgcctcgcagtcc
tgcgtcttccgggagctgctgagaaacctgtgcactttccgcagagctgccgggggcgag
gggatttggaagctcaagcccgaatactgctga
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integrated database retrieval system
