Oryctolagus cuniculus (rabbit): 100348757
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Entry
100348757 CDS
T03373
Name
(RefSeq) pumilio homolog 1 isoform X6
KO
K17943
pumilio RNA-binding family
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100348757
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Gene cluster
GFIT
Motif
Pfam:
PUF
SAWADEE
CFAP61_N
Motif
Other DBs
NCBI-GeneID:
100348757
NCBI-ProteinID:
XP_002716108
Ensembl:
ENSOCUG00000008641
LinkDB
All DBs
Position
13:135157413..135308166
Genome browser
AA seq
1186 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQNFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFEGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLA
PAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAA
AAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFG
QGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAA
AAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSTNLASSSFYGNNSLSSSSQSSSL
FSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRT
SSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNG
SGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNR
YPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNY
VIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRELDGH
VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD
QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN
VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIV
MHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaaaagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgccgctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagaatttccatgtg
aacagtgaggtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgaaggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtacagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggattcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacctaatgcacttgctgtccagcagttgaca
gctgctcagcagcagcaatatgcgctcgcagcggctcatcagcctcacatcggtttagct
cccgctgcatttgtcccaaatccatacatcatcagtgctgctcccccaggaacggacccc
tacaccgctggattggctgcagcagcaacactaggcccagctgtggtcccacaccagtat
tatggagttactccctggggagtctatcccgccagtcttttccagcagcaagctgctgct
gctgcagcagctactaattctgctaatcagcagaccactccacaggctcagcaaggacag
cagcaggttctccgaggaggagccagccagcgccctttgaccccaaatcaaaaccagcag
ggccaacaaacagatccgctagtggcagctgcagcagtgaattctgcccttgcgtttgga
caaggtctggctgcaggcatgccaggttatccagtcttggctccagctgcttactatgac
caaactggtgcccttgtggtgaatgcaggggcaagaaatggtcttggagcccctgttcga
cttgtagctcctgcgccagtcatcattagctcttcagctgcacaagcagctgttgcagcg
gccgcagcttcagcaaacggagcagccggtggtcttgctggaacaacaaatggaccattt
cgccctttaggaacccagcagccccagccccagccccagcagcagcccagtaccaacctg
gcctccagctctttctatggcaacaactctctgagcagcagttcacagagcagctccctc
ttctcccagggctctgcccagcctgccaacacgtctttgggatttggaagtagcagttct
cttggtgccaccctgggatcagcacttggagggtttggaacagcagttgcaaactccaac
actggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagaggaca
tcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcctct
cctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacaccacct
ccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaatggc
agtggaagatacatctctgctgcccccggcgctgaagccaagtaccgcagcgcaagcagc
gcttccagcctcttcagccccagcagcaccctcttttcatcctcccggttgcggtatggg
atgtctgacgtcatgccctctggtaggagcaggcttttggaagattttcgaaataaccgc
taccccaatttacaactgcgggagattgctggacatataatggaattttcccaagaccag
catgggtccaggttcattcagctgaagctagaacgtgccaccacagcagagcgccagctt
gttttcaatgaaatcctccaggctgcgtaccaactgatggtggatgtgtttgggaattat
gtcattcagaagttctttgaatttggcagccatgaacagaagctggctttggcagaacgc
atccgaggccacgtcctgtccttggcactacagatgtacggctgccgagttatccagaaa
gctcttgaatttattcccgcagaccagcagaatgaaatggttcgggaactggatggccac
gtcctgaagtgtgtcaaagaccagaatggcaaccacgtggttcagaaatgcattgaatgc
gtgcagccccagtccttacagtttatcatcgatgcttttaagggacaggtgtttgctttg
tctacgcatccttatggctgccgagtgattcagagaattctggagcactgtctccctgac
cagacactgcctatcttagaggagctgcaccagcacacggagcaacttgtccaggatcaa
tatggaaattatgtaatccaacatgtattggagcatggtcgtcctgaggataaaagcaaa
attgtagcagaaatccgaggcaatgtccttgtattgagtcagcacaaatttgcaagcaac
gtcgtagaaaagtgtgtcactcacgcctcacggacagagcgtgccgtgctcatcgatgag
gtgtgcaccatgaacgacggtccccacagtgccttatacaccatgatgaaggaccagtat
gccaactatgtggtccagaagatgatcgacgtggcagaaccaggccagcgcaagatcgtc
atgcataagatccggccccacatcgccacccttcgcaagtacacctacggcaagcacatt
ttggccaagctggagaaatactacatgaagaatggtgttgacttggggcccatctgtggc
ccccctaatggtattatctga
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