KEGG   Oryctolagus cuniculus (rabbit): 100348757
Entry
100348757         CDS       T03373                                 
Name
(RefSeq) pumilio homolog 1 isoform X6
  KO
K17943  pumilio RNA-binding family
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu05017  Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05017 Spinocerebellar ataxia
    100348757
SSDB
Motif
Pfam: PUF SAWADEE CFAP61_N
Other DBs
NCBI-GeneID: 100348757
NCBI-ProteinID: XP_002716108
Ensembl: ENSOCUG00000008641
LinkDB
Position
13:135157413..135308166
AA seq 1186 aa
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQNFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFEGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLA
PAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQQQAAA
AAAATNSANQQTTPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFG
QGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQAAVAA
AAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQQPSTNLASSSFYGNNSLSSSSQSSSL
FSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDLYKRT
SSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNG
SGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGMSDVMPSGRSRLLEDFRNNR
YPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNY
VIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPADQQNEMVRELDGH
VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPD
QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASN
VVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIV
MHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgagcgttgcatgtgtcttgaaaagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgccgctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttcccaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataataatagcaaacatcgatggcctactggggataacattcatgcagaacat
caggtacgttctatggatgaactgaatcatgattttcaagcacttgctctggagggaaga
gcgatgggagagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagaatttccatgtg
aacagtgaggtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagc
atggtggagtatgtattgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgaaggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtacagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctcttcagttt
gattattcaggcacgcaggtacctgtggattcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctgttccaaagacctaatgcacttgctgtccagcagttgaca
gctgctcagcagcagcaatatgcgctcgcagcggctcatcagcctcacatcggtttagct
cccgctgcatttgtcccaaatccatacatcatcagtgctgctcccccaggaacggacccc
tacaccgctggattggctgcagcagcaacactaggcccagctgtggtcccacaccagtat
tatggagttactccctggggagtctatcccgccagtcttttccagcagcaagctgctgct
gctgcagcagctactaattctgctaatcagcagaccactccacaggctcagcaaggacag
cagcaggttctccgaggaggagccagccagcgccctttgaccccaaatcaaaaccagcag
ggccaacaaacagatccgctagtggcagctgcagcagtgaattctgcccttgcgtttgga
caaggtctggctgcaggcatgccaggttatccagtcttggctccagctgcttactatgac
caaactggtgcccttgtggtgaatgcaggggcaagaaatggtcttggagcccctgttcga
cttgtagctcctgcgccagtcatcattagctcttcagctgcacaagcagctgttgcagcg
gccgcagcttcagcaaacggagcagccggtggtcttgctggaacaacaaatggaccattt
cgccctttaggaacccagcagccccagccccagccccagcagcagcccagtaccaacctg
gcctccagctctttctatggcaacaactctctgagcagcagttcacagagcagctccctc
ttctcccagggctctgcccagcctgccaacacgtctttgggatttggaagtagcagttct
cttggtgccaccctgggatcagcacttggagggtttggaacagcagttgcaaactccaac
actggcagtggctcccgccgtgactccctgactggcagcagtgacctttataagaggaca
tcgagcagcttgacccccattggacacagtttttataacggccttagcttttcctcctct
cctggacccgtgggcatgcctctccctagtcagggaccaggacattcacagacaccacct
ccttccctctcttcacatggatcctcttcaagcttaaacctgggaggactcacaaatggc
agtggaagatacatctctgctgcccccggcgctgaagccaagtaccgcagcgcaagcagc
gcttccagcctcttcagccccagcagcaccctcttttcatcctcccggttgcggtatggg
atgtctgacgtcatgccctctggtaggagcaggcttttggaagattttcgaaataaccgc
taccccaatttacaactgcgggagattgctggacatataatggaattttcccaagaccag
catgggtccaggttcattcagctgaagctagaacgtgccaccacagcagagcgccagctt
gttttcaatgaaatcctccaggctgcgtaccaactgatggtggatgtgtttgggaattat
gtcattcagaagttctttgaatttggcagccatgaacagaagctggctttggcagaacgc
atccgaggccacgtcctgtccttggcactacagatgtacggctgccgagttatccagaaa
gctcttgaatttattcccgcagaccagcagaatgaaatggttcgggaactggatggccac
gtcctgaagtgtgtcaaagaccagaatggcaaccacgtggttcagaaatgcattgaatgc
gtgcagccccagtccttacagtttatcatcgatgcttttaagggacaggtgtttgctttg
tctacgcatccttatggctgccgagtgattcagagaattctggagcactgtctccctgac
cagacactgcctatcttagaggagctgcaccagcacacggagcaacttgtccaggatcaa
tatggaaattatgtaatccaacatgtattggagcatggtcgtcctgaggataaaagcaaa
attgtagcagaaatccgaggcaatgtccttgtattgagtcagcacaaatttgcaagcaac
gtcgtagaaaagtgtgtcactcacgcctcacggacagagcgtgccgtgctcatcgatgag
gtgtgcaccatgaacgacggtccccacagtgccttatacaccatgatgaaggaccagtat
gccaactatgtggtccagaagatgatcgacgtggcagaaccaggccagcgcaagatcgtc
atgcataagatccggccccacatcgccacccttcgcaagtacacctacggcaagcacatt
ttggccaagctggagaaatactacatgaagaatggtgttgacttggggcccatctgtggc
ccccctaatggtattatctga

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